RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 CTAGE4Q8IX94 777 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 OGFOD1Q8N543 542 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CYP2W1Q8TAV3 490 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 HNRNPLLQ8WVV9 542 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 VPS33BQ9H267 617 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 ARFGAP3Q9NP61 516 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 TFR2Q9UP52 801 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CLRN2A0PK11 232 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 KRT18P05783 430 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 PLEKP08567 350 aaPredicted RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CACNB1Q02641 598 aaPredicted RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 KIF5AQ12840 1032 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CCDC40Q4G0X9 1142 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 EPM2AIP1Q7L775 607 aaPredicted RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CHURC1Q8WUH1 139 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 SYN2Q92777 582 aaPredicted RBP16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 FAM184BQ9ULE4 1060 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 TRAF3IP3Q9Y228 551 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 SMCHD1A6NHR9 2005 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 ANO9A1A5B4 782 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 RAD17O75943 681 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 TBC1D8O95759 1140 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 PLA2G4AP47712 749 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 CYP27A1Q02318 531 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 PDXDC1Q6P996 788 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 NELFCDQ8IXH7 590 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 NUCKS1Q9H1E3 243 aaKnown RBP16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 SAR1BQ9Y6B6 198 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 SEC31AO94979 1220 aaKnown RBP16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 TFRCP02786 760 aaKnown RBP16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 TUBBP07437 444 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 PABPC4Q13310 644 aaKnown RBP eCLIP16.94■□□□□ 0.31e-7■■■□□ 18.6
UBE2D3-207ENST00000394801 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 ADAM9Q13443 819 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 ASTE1Q2TB18 679 aaPredicted RBP16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 FAM83BQ5T0W9 1011 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 FAM83AQ86UY5 434 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 LARGE2Q8N3Y3 721 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 CEP72Q9P209 647 aa16.94■□□□□ 0.3
UBE2D3-207ENST00000394801 SSU72P8A0A1W2PR75 194 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 MEIS1O00470 390 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 NOL4O94818 638 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 ATP1A1P05023 1023 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 ZNF76P36508 570 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 EIF4A3P38919 411 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 KIF11P52732 1056 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 CCDC155Q8N6L0 562 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 VCPKMTQ9H867 229 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 PCDHA13Q9Y5I0 950 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 GCOM1H8Y6P7 765 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 CETN3O15182 167 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 USO1O60763 962 aaKnown RBP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 EYA4O95677 639 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 POLR2MP0CAP2 368 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 KCNA3P22001 575 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 FAM193AP78312 1265 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 MAP3K10Q02779 954 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 HGSNATQ68CP4 663 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 OTOP1Q7RTM1 612 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 UBXN6Q9BZV1 441 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 DUSP10Q9Y6W6 482 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 COL4A5P29400 1685 aa16.93■□□□□ 0.3
UBE2D3-207ENST00000394801 EML1O00423 815 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 ENC1O14682 589 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 PSMD10O75832 226 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 CASP5P51878 434 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 TERF2Q15554 542 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 KNOP1Q1ED39 458 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 CACNA2D4Q7Z3S7 1137 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 TBC1D5Q92609 795 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 WDR18Q9BV38 432 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 IFIH1Q9BYX4 1025 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 DEFB129Q9H1M3 183 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 PDXKO00764 312 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 PJA2O43164 708 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 SASH3O75995 380 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 CFBP00751 764 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 ERCC3P19447 782 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 HOXD13P35453 343 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 FAM160B2Q86V87 743 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 SLC5A5Q92911 643 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms