RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 NDUFAF2Q8N183 169 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 FBXO18Q8NFZ0 1043 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 CEP95Q96GE4 821 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 EPS8L2Q9H6S3 715 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 RUBCNLQ9H714 662 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 LIG4P49917 911 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 TBL3Q12788 808 aaKnown RBP14.38□□□□□ -0.11
USP49-203ENST00000394253 RCSD1Q6JBY9 416 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 KRT38O76015 456 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 CLK1P49759 484 aaKnown RBP14.38□□□□□ -0.11
USP49-203ENST00000394253 PLTPP55058 493 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 GUCA1CO95843 209 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 KRT6AP02538 564 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 KRT6BP04259 564 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 KRT6CP48668 564 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 CYP2J2P51589 502 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 KRT77Q7Z794 578 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 TNIP2Q8NFZ5 429 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 GAS7O60861 476 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 SOX5P35711 763 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 COPS2P61201 443 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 ACRBPQ8NEB7 543 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 LCMT1Q9UIC8 334 aa14.38□□□□□ -0.11
USP49-203ENST00000394253 DEPTORQ8TB45 409 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 OLFM1Q99784 485 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 CLEC4MQ9H2X3 399 aaPredicted RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 SBNO2Q9Y2G9 1366 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 CCDC22O60826 627 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 FHDC1Q9C0D6 1143 aaPredicted RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 BIN2Q9UBW5 565 aaPredicted RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 SYNGAP1Q96PV0 1343 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 LRRIQ3A6PVS8 624 aaPredicted RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 INAQ16352 499 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 DAB2IPQ5VWQ8 1189 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 SMCR8Q8TEV9 937 aaPredicted RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 OTULINQ96BN8 352 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 THUMPD2Q9BTF0 503 aaKnown RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 ZBTB3Q9H5J0 574 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 ATP2B4P23634 1241 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 DR1Q01658 176 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 ANKRD44Q8N8A2 993 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 KLC4Q9NSK0 619 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 AP4S1Q9Y587 144 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 MED7O43513 233 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 MAPK4P31152 587 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 CSTF3Q12996 717 aaKnown RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 NLRP3Q96P20 1036 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 HPS5Q9UPZ3 1129 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 ATP8B3O60423 1300 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 PAPOLAP51003 745 aaKnown RBP14.37□□□□□ -0.11
USP49-203ENST00000394253 RAD23BP54727 409 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 PRKG1Q13976 671 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 KLHL12Q53G59 568 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 DLGAP3O95886 979 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 KRT17Q04695 432 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 EXOC3L4Q17RC7 722 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 KNL1Q8NG31 2342 aa14.37□□□□□ -0.11
USP49-203ENST00000394253 HSPA2P54652 639 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 HABP4Q5JVS0 413 aaKnown RBP14.36□□□□□ -0.11
USP49-203ENST00000394253 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 C16orf62Q7Z3J2 963 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 BEND6Q5SZJ8 279 aaPredicted RBP14.36□□□□□ -0.11
USP49-203ENST00000394253 C16orf71Q8IYS4 520 aaPredicted RBP14.36□□□□□ -0.11
USP49-203ENST00000394253 MAML3Q96JK9 1138 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 OSBPL9Q96SU4 736 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 COPEO14579 308 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 BEGAINQ9BUH8 593 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 STON1Q9Y6Q2 735 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 GRAMD1AQ96CP6 724 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 AFPP02771 609 aaKnown RBP14.36□□□□□ -0.11
USP49-203ENST00000394253 ARL4AP40617 200 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 FAM178BQ8IXR5 827 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 METTL13Q8N6R0 699 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 KDRP35968 1356 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 TIAM1Q13009 1591 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 PNOCQ13519 176 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 DARS2Q6PI48 645 aaKnown RBP14.36□□□□□ -0.11
USP49-203ENST00000394253 IKBIPQ70UQ0 350 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 MAEAQ7L5Y9 396 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 UVRAGQ9P2Y5 699 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 MYO1DO94832 1006 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 DEPDC7Q96QD5 511 aa14.36□□□□□ -0.11
USP49-203ENST00000394253 ATP5J2-PTCD1G3V325 749 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 BRD1O95696 1058 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 ARMCX4Q5H9R4 360 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 RASA4BC9J798 803 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 RASA4O43374 803 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 PPM1KQ8N3J5 372 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 LOC102724159A0A0B4J2E5 919 aa14.35□□□□□ -0.11
USP49-203ENST00000394253 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 PWP2Q15269 919 aaKnown RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 RSRC2Q7L4I2 434 aaKnown RBP14.35□□□□□ -0.11
USP49-203ENST00000394253 PIGUQ9H490 435 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms