RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 PPFIA4O75335 1185 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 ATG7O95352 703 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 HOXD8P13378 290 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-203ENST00000394157 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-203ENST00000394157 LONP1P36776 959 aaKnown RBP21.78■■□□□ 1.08
PSEN1-203ENST00000394157 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-203ENST00000394157 IGSF22Q8N9C0 903 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 LEO1Q8WVC0 666 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-203ENST00000394157 SEPT1Q8WYJ6 367 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 GJA10Q969M2 543 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 UNC45AQ9H3U1 944 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 PCDHA10Q9Y5I2 948 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 SYNRGQ9UMZ2 1314 aa21.78■■□□□ 1.08
PSEN1-203ENST00000394157 DDX39AO00148 427 aaKnown RBP21.77■■□□□ 1.08
PSEN1-203ENST00000394157 ZEB2O60315 1214 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 KPNA6O60684 536 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 CCNE2O96020 404 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 GJB1P08034 283 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 TECP42680 631 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 ACTR2P61160 394 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 FSCN1Q16658 493 aaKnown RBP21.77■■□□□ 1.08
PSEN1-203ENST00000394157 HSDL1Q3SXM5 330 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 MIS18BP1Q6P0N0 1132 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 RNF180Q86T96 592 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 ARRDC4Q8NCT1 418 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 ERMNQ8TAM6 284 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 UIMC1Q96RL1 719 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 GPR20Q99678 358 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 BCAS3Q9H6U6 928 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 DISC1Q9NRI5 854 aa21.77■■□□□ 1.08
PSEN1-203ENST00000394157 FBXO2Q9UK22 296 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-203ENST00000394157 VWA3AA6NCI4 1184 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 ADAMTS4O75173 837 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 PSAPP07602 524 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 C6orf222P0C671 652 aaPredicted RBP21.76■■□□□ 1.07
PSEN1-203ENST00000394157 MARCKSP29966 332 aaPredicted RBP21.76■■□□□ 1.07
PSEN1-203ENST00000394157 EPHA7Q15375 998 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 DGKDQ16760 1214 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 ABHD15Q6UXT9 468 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 MIER3Q7Z3K6 550 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 ZNF579Q8NAF0 562 aaKnown RBP21.76■■□□□ 1.07
PSEN1-203ENST00000394157 PCSK9Q8NBP7 692 aaKnown RBP21.76■■□□□ 1.07
PSEN1-203ENST00000394157 NEK9Q8TD19 979 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 AFG1LQ8WV93 481 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 LENG1Q96BZ8 264 aaPredicted RBP21.76■■□□□ 1.07
PSEN1-203ENST00000394157 LRWD1Q9UFC0 647 aa21.76■■□□□ 1.07
PSEN1-203ENST00000394157 SLC26A4O43511 780 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 CUTAO60888 179 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 ME1P48163 572 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 IL17AQ16552 155 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 KLHDC9Q8NEP7 349 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 DEFB118Q96PH6 123 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 GBP4Q96PP9 640 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 TMEM106CQ9BVX2 250 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 SAMM50Q9Y512 469 aa21.75■■□□□ 1.07
PSEN1-203ENST00000394157 IGKV6D-21A0A0A0MT36 114 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 GSTTP1A0A1W2PQM5 241 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 POTEFA5A3E0 1075 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 CTAGE5O15320 804 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 CHMP2AO43633 222 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 PGK1P00558 417 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 MMP3P08254 477 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 SUPT20HL2P0C7V6 817 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 MKRN4PQ13434 485 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-203ENST00000394157 GNASQ5JWF2 1037 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 HAUS3Q68CZ6 603 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 NCAPH2Q6IBW4 605 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 TSEN34Q9BSV6 310 aaKnown RBP21.74■■□□□ 1.07
PSEN1-203ENST00000394157 CRISPLD2Q9H0B8 497 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 OGDHLQ9ULD0 1010 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 DOCK5Q9H7D0 1870 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 TCHHQ07283 1943 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 EMSYQ7Z589 1322 aa21.74■■□□□ 1.07
PSEN1-203ENST00000394157 POTEMA6NI47 508 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 SORBS3O60504 671 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 DKC1O60832 514 aaKnown RBP eCLIP21.73■■□□□ 1.07
PSEN1-203ENST00000394157 LGR5O75473 907 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 SGPL1O95470 568 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 MUTP22033 750 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 TCF7P36402 384 aaPredicted RBP21.73■■□□□ 1.07
PSEN1-203ENST00000394157 SLC26A2P50443 739 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 SP4Q02446 784 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 FAM160B1Q5W0V3 765 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 AZI2Q9H6S1 392 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 PCDHA7Q9UN72 937 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 FRMPD3Q5JV73 1810 aa21.73■■□□□ 1.07
PSEN1-203ENST00000394157 MOXD2PA6NHM9 499 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 EML1O00423 815 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 P4HBP07237 508 aaKnown RBP21.72■■□□□ 1.07
PSEN1-203ENST00000394157 PTGS1P23219 599 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 GJA8P48165 433 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 LRRC41Q15345 812 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 KRT79Q5XKE5 535 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 ADALQ6DHV7 355 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 PLPPR4Q7Z2D5 763 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 KCTD17Q8N5Z5 321 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 AFAP1L1Q8TED9 768 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 U2AF1L4Q8WU68 220 aaKnown RBP21.72■■□□□ 1.07
PSEN1-203ENST00000394157 CHAMP1Q96JM3 812 aa21.72■■□□□ 1.07
PSEN1-203ENST00000394157 POLR3CQ9BUI4 534 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms