RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PFASO15067 1338 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 SMIM24O75264 130 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 NR2F2P24468 414 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 GUCY1A2P33402 732 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 BCAMP50895 628 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 HERVK_113P62684 666 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 FAM47AQ5JRC9 791 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 ANKRD20A3Q5VUR7 823 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 CAPRIN2Q6IMN6 1127 aaKnown RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 FAM133AQ8N9E0 248 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 ARHGEF2Q92974 986 aaKnown RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 PPP1R12AO14974 1030 aaPredicted RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 ZNF185O15231 689 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 CASP1P29466 404 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 PHBP35232 272 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 DYNC1I2Q13409 638 aaKnown RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 RCSD1Q6JBY9 416 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 TMBIM4Q9HC24 238 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 RBM12Q9NTZ6 932 aaKnown RBP9.36□□□□□ -0.91
GABRA1-202ENST00000393943 EXOC7Q9UPT5 735 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 SPEF2Q9C093 1822 aa9.36□□□□□ -0.91
GABRA1-202ENST00000393943 CCT8L1PA6NM43 557 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 THAP12O43422 761 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PRKAB2O43741 272 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ECEL1O95672 775 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 HSPA9P38646 679 aaKnown RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PMS2P54278 862 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 MAP3K21Q5TCX8 1036 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 TRIM11Q96F44 468 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 XPO6Q96QU8 1125 aaKnown RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 CCDC87Q9NVE4 849 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ADAMTS1Q9UHI8 967 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 FMN2Q9NZ56 1722 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 MAPK13O15264 365 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PJA2O43164 708 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PLTPP55058 493 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 CHRNDQ07001 517 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ARHGAP18Q8N392 663 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ROPN1BQ9BZX4 212 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ROPN1Q9HAT0 212 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 DDX25Q9UHL0 483 aaKnown RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 FBXL5Q9UKA1 691 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 GFPT1Q06210 699 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PDIA5Q14554 519 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 GRM4Q14833 912 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ANKRD40Q6AI12 368 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 TBC1D1Q86TI0 1168 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 DAGLBQ8NCG7 672 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 LRRC8CQ8TDW0 803 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 TSC22D3Q99576 134 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 TRIM10Q9UDY6 481 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 BCAP29Q9UHQ4 241 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ATF2P15336 505 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PSMC2P35998 433 aaKnown RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 NAALADL2Q58DX5 795 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 LGSNQ5TDP6 509 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 NBPF5PQ86XG9 351 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 ANKRD42Q8N9B4 389 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 PPP1R14CQ8TAE6 165 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 MAGEC3Q8TD91 643 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 SUDS3Q9H7L9 328 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-202ENST00000393943 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 AGPAT5Q9NUQ2 364 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 STOML1Q9UBI4 398 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 XDHP47989 1333 aa9.35□□□□□ -0.91
GABRA1-202ENST00000393943 GCNT3O95395 438 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 KRT15P19012 456 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 TPTE2Q6XPS3 522 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 USP49Q70CQ1 688 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 RAD54LQ92698 747 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 RPGRQ92834 1020 aaKnown RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 DTNBP1Q96EV8 351 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 EYA3Q99504 573 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 ELAC2Q9BQ52 826 aaKnown RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 DNAI2Q9GZS0 605 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 BARHL2Q9NY43 387 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 USH1CQ9Y6N9 552 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 KRT14P02533 472 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 USP11P51784 963 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 SCARF1Q14162 830 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 PREPLQ4J6C6 727 aaPredicted RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 SMCR8Q8TEV9 937 aaPredicted RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 SETDB2Q96T68 719 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 BIN2Q9UBW5 565 aaPredicted RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 ARL2BPQ9Y2Y0 163 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 MYO1FO00160 1098 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 CYP27B1O15528 508 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 SLC1A4P43007 532 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 MYO1EQ12965 1108 aa9.34□□□□□ -0.91
GABRA1-202ENST00000393943 FAM133BQ5BKY9 247 aaKnown RBP9.34□□□□□ -0.91
GABRA1-202ENST00000393943 TBC1D22AQ8WUA7 517 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms