RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 DDX25Q9UHL0 483 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 TCEAL9Q9UHQ7 104 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 ZNF215Q9UL58 517 aaPredicted RBP21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 DDX39AO00148 427 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 MSH4O15457 936 aa21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 DHX15O43143 795 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 CCNT1O60563 726 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 ACTR2P61160 394 aa21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 GNL2Q13823 731 aaKnown RBP21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 SH3RF1Q7Z6J0 888 aa21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 SESTD1Q86VW0 696 aa21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 PPP1R13LQ8WUF5 828 aa21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 TRPV6Q9H1D0 765 aa21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 FOXP1Q9H334 677 aaPredicted RBP21.52■■□□□ 1.04
PDLIM7-204ENST00000393546 TRIM43BA6NCK2 446 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 KIAA0355O15063 1070 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 B4GALT4O60513 344 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 GLG1Q92896 1179 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 SNX21Q969T3 373 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 TRIM43Q96BQ3 446 aaPredicted RBP21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 RIT2Q99578 217 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 LBHD1Q9BQE6 289 aaPredicted RBP21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 SMARCAD1Q9H4L7 1026 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 AZI2Q9H6S1 392 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 HDAC6Q9UBN7 1215 aa21.51■■□□□ 1.03
PDLIM7-204ENST00000393546 FAM205CA6NFA0 338 aa21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 K7ELQ4 463 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 ATG7O95352 703 aa21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 RAG1P15918 1043 aa21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 KRT76Q01546 638 aa21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 ZNF746Q6NUN9 644 aaPredicted RBP21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 SLC5A5Q92911 643 aa21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 TRMT13Q9NUP7 481 aaKnown RBP21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 NOD1Q9Y239 953 aa21.5■■□□□ 1.03
PDLIM7-204ENST00000393546 MARCH6O60337 910 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 GAS7O60861 476 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 LGR5O75473 907 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 CCNE2O96020 404 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 LRCH2Q5VUJ6 765 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 TRIM50Q86XT4 487 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 TEKT3Q9BXF9 490 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 ERAP1Q9NZ08 941 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 GTF2IRD1Q9UHL9 959 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 TBX21Q9UL17 535 aa21.49■■□□□ 1.03
PDLIM7-204ENST00000393546 H3BQV1 296 aa21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 PTGISQ16647 500 aa21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 LARP1BQ659C4 914 aaKnown RBP21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 GDF6Q6KF10 455 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 MIS18BP1Q6P0N0 1132 aa21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 ABHD15Q6UXT9 468 aa21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 SMAP1Q8IYB5 467 aaPredicted RBP21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 EMSYQ7Z589 1322 aa21.48■■□□□ 1.03
PDLIM7-204ENST00000393546 BACH1O14867 736 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 SLC37A4O43826 429 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 BAG4O95429 457 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 TIMP1P01033 207 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 SMIM10L2AP0DMW4 78 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 SMIM10L2BP0DMW5 78 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 MAGEA10P43363 369 aaPredicted RBP21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 STAT5BP51692 787 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 MDM2Q00987 491 aaPredicted RBP21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 FAM160B1Q5W0V3 765 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 PLPPR4Q7Z2D5 763 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 NOSTRINQ8IVI9 506 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 HSCBQ8IWL3 235 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 ETNPPLQ8TBG4 499 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 INTS4Q96HW7 963 aaKnown RBP21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 FAM20AQ96MK3 541 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 PCYT2Q99447 389 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 RNPEPQ9H4A4 650 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 SAMM50Q9Y512 469 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 PCDHA10Q9Y5I2 948 aa21.47■■□□□ 1.03
PDLIM7-204ENST00000393546 C17orf102A2RUQ5 167 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 WDR64B1ANS9 1081 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 TBX3O15119 743 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 PSMD10O75832 226 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 PSAPP07602 524 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 GNAT1P11488 350 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 CYP2C9P11712 490 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 U2AF2P26368 475 aaKnown RBP eCLIP21.46■■□□□ 1.037e-7■■■□□ 15.8
PDLIM7-204ENST00000393546 MCTP1Q6DN14 999 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 BADQ92934 168 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 TNPO1Q92973 898 aaKnown RBP21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 GJA10Q969M2 543 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 HIPK3Q9H422 1215 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 KCNMB3Q9NPA1 279 aa21.46■■□□□ 1.03
PDLIM7-204ENST00000393546 IGKV6D-21A0A0A0MT36 114 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 ATP2B1P20020 1258 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 MARK3P27448 753 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 SLC26A2P50443 739 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 SWSAP1Q6NVH7 229 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 CHRDL2Q6WN34 429 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 SLFN12Q8IYM2 578 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 GDF15Q99988 308 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 PPP1R12CQ9BZL4 782 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 ZNF302Q9NR11 478 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 DISC1Q9NRI5 854 aa21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 NOL7Q9UMY1 257 aaKnown RBP21.45■■□□□ 1.02
PDLIM7-204ENST00000393546 KIF28PB7ZC32 967 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 CHMP2AO43633 222 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms