RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 PSMA7O14818 248 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 DHX15O43143 795 aaKnown RBP9.63□□□□□ -0.87
TDP1-203ENST00000393454 SLC25A27O95847 323 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CYP2C8P10632 490 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 ERCC3P19447 782 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 SLC12A3P55017 1021 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 CACNB1Q02641 598 aaPredicted RBP9.63□□□□□ -0.87
TDP1-203ENST00000393454 CCDC65Q8IXS2 484 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 SYT2Q8N9I0 419 aaPredicted RBP9.63□□□□□ -0.87
TDP1-203ENST00000393454 BANK1Q8NDB2 785 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 SMCR8Q8TEV9 937 aaPredicted RBP9.63□□□□□ -0.87
TDP1-203ENST00000393454 MAF1Q9H063 256 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 BHMT2Q9H2M3 363 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 TXNRD2Q9NNW7 524 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 RBPJLQ9UBG7 517 aa9.63□□□□□ -0.87
TDP1-203ENST00000393454 PDHXO00330 501 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 ATP9AO75110 1047 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 EYA4O95677 639 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 CYP11B2P19099 503 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 Q3C1V9 767 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 DNERQ8NFT8 737 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 GPRASP2Q96D09 838 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 DNAJC19Q96DA6 116 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 DHTKD1Q96HY7 919 aaPredicted RBP9.62□□□□□ -0.87
TDP1-203ENST00000393454 ZNF830Q96NB3 372 aaPredicted RBP9.62□□□□□ -0.87
TDP1-203ENST00000393454 NACC1Q96RE7 527 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 LXNQ9BS40 222 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 ADD3Q9UEY8 706 aaKnown RBP9.62□□□□□ -0.87
TDP1-203ENST00000393454 NRBP1Q9UHY1 535 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 TRIM49BA6NDI0 452 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 ZBTB39O15060 712 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 MAFGO15525 162 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 TPM3P06753 285 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 ZNF18P17022 549 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 COPB2P35606 906 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 COASYQ13057 564 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 PSMD2Q13200 908 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 STXBP2Q15833 593 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 GNPTABQ3T906 1256 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 ARSHQ5FYA8 562 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
TDP1-203ENST00000393454 CCDC186Q7Z3E2 898 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 KIAA0895Q8NCT3 520 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 IWS1Q96ST2 819 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 TBC1D7Q9P0N9 293 aa9.62□□□□□ -0.87
TDP1-203ENST00000393454 KIAA1217Q5T5P2 1943 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 BTBD19C9JJ37 291 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 SORBS3O60504 671 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 STAM2O75886 525 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
TDP1-203ENST00000393454 MUTP22033 750 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 PTGS1P23219 599 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 MSNP26038 577 aaKnown RBP9.61□□□□□ -0.87
TDP1-203ENST00000393454 PPP1R2P41236 205 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 ALDH5A1P51649 535 aaPredicted RBP9.61□□□□□ -0.87
TDP1-203ENST00000393454 KCTD2Q14681 263 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 LRRC41Q15345 812 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 CHADLQ6NUI6 762 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 B3GNT9Q6UX72 402 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 FILIP1Q7Z7B0 1213 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 NEK9Q8TD19 979 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 P2RX5Q93086 422 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 CDHR1Q96JP9 859 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 NAP1L5Q96NT1 182 aaPredicted RBP9.61□□□□□ -0.87
TDP1-203ENST00000393454 INPP4AQ96PE3 977 aaPredicted RBP9.61□□□□□ -0.87
TDP1-203ENST00000393454 MMP19Q99542 508 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 R3HDMLQ9H3Y0 253 aa9.61□□□□□ -0.87
TDP1-203ENST00000393454 LCTP09848 1927 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 BICDL2A1A5D9 508 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 ESPNB1AK53 854 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 EIF3JO75822 258 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 PGK2P07205 417 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 CCNE1P24864 410 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 JAK3P52333 1124 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 PMS1P54277 932 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 HUNKP57058 714 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 ERVK-9P63128 1117 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 ERVK-24P63145 666 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 KRT76Q01546 638 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 SP4Q02446 784 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 GIT2Q14161 759 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 FAM26FQ5R3K3 315 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 SPRYD7Q5W111 196 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 CST9Q5W186 159 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 SEPT14Q6ZU15 432 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 TRMT1LQ7Z2T5 733 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 ZSCAN30Q86W11 494 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 ANKRD20A12PQ8NF67 263 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 BRI3BPQ8WY22 251 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 REEP2Q9BRK0 252 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 RUSC1Q9BVN2 902 aa9.6□□□□□ -0.87
TDP1-203ENST00000393454 SRRTQ9BXP5 876 aaKnown RBP9.6□□□□□ -0.87
TDP1-203ENST00000393454 ZSWIM4Q9H7M6 989 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms