RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MCM7P33993 719 aa14.97□□□□□ -0.01
USP44-202ENST00000393091 PRAMEF19Q5SWL8 479 aa14.97□□□□□ -0.01
USP44-202ENST00000393091 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
USP44-202ENST00000393091 LRCH2Q5VUJ6 765 aa14.97□□□□□ -0.01
USP44-202ENST00000393091 SPRYD3Q8NCJ5 442 aa14.97□□□□□ -0.01
USP44-202ENST00000393091 CCSER1Q9C0I3 900 aa14.97□□□□□ -0.01
USP44-202ENST00000393091 COL1A2P08123 1366 aa14.97□□□□□ -0.01
USP44-202ENST00000393091 ALPK3Q96L96 1907 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 A0A1W2PQ27 194 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 A0A1W2PQ64 194 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 A0A1W2PQD8 194 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 WDR64B1ANS9 1081 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 DNM1LO00429 736 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 UNC93B1Q9H1C4 597 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 TANC1Q9C0D5 1861 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 STBD1O95210 358 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 GGPS1O95749 300 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 SUPT20HL2P0C7V6 817 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 COL6A1P12109 1028 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 SEPT1Q8WYJ6 367 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 RAB34Q9BZG1 259 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 ZHX1Q9UKY1 873 aaPredicted RBP14.96□□□□□ -0.01
USP44-202ENST00000393091 PCDHA12Q9UN75 941 aa14.96□□□□□ -0.01
USP44-202ENST00000393091 DHX37Q8IY37 1157 aaKnown RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 LEO1Q8WVC0 666 aaPredicted RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 TNPO1Q92973 898 aaKnown RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 PCYT2Q99447 389 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 SPTLC2O15270 562 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 ZEB2O60315 1214 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 GAS7O60861 476 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 SGPL1O95470 568 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 F2P00734 622 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 ACTR2P61160 394 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 DNM1Q05193 864 aaKnown RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 TMEM266Q2M3C6 531 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 PCSK9Q8NBP7 692 aaKnown RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 C16orf70Q9BSU1 422 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 PCDHA10Q9Y5I2 948 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 DDX49Q9Y6V7 483 aaKnown RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 NBR1Q14596 966 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 SNX17Q15036 470 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 MIS18BP1Q6P0N0 1132 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 DTHD1Q6ZMT9 781 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 FAM43BQ6ZT52 329 aaPredicted RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 ELOA2Q8IYF1 753 aaPredicted RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 ARRDC4Q8NCT1 418 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 OR6J1Q8NGC5 347 aa14.95□□□□□ -0.02
USP44-202ENST00000393091 TTC12Q9H892 705 aaPredicted RBP14.95□□□□□ -0.02
USP44-202ENST00000393091 DKC1O60832 514 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP44-202ENST00000393091 PSAPP07602 524 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 RPA1P27694 616 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 DGKDQ16760 1214 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 TMEM119Q4V9L6 283 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 ADALQ6DHV7 355 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 C4orf19Q8IY42 314 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 KCNN1Q92952 543 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 NIFKQ9BYG3 293 aaKnown RBP14.94□□□□□ -0.02
USP44-202ENST00000393091 AP5M1Q9H0R1 490 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 HTTP42858 3142 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 PURAQ00577 322 aaKnown RBP14.94□□□□□ -0.02
USP44-202ENST00000393091 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 MMTAG2Q9BU76 263 aaKnown RBP14.94□□□□□ -0.02
USP44-202ENST00000393091 XPNPEP3Q9NQH7 507 aa14.94□□□□□ -0.02
USP44-202ENST00000393091 LRRC41Q15345 812 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 FSCN1Q16658 493 aaKnown RBP14.93□□□□□ -0.02
USP44-202ENST00000393091 RESP18Q5W5W9 173 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 CNNM4Q6P4Q7 775 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 CYFIP1Q7L576 1253 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 DBR1Q9UK59 544 aaKnown RBP14.93□□□□□ -0.02
USP44-202ENST00000393091 KDM3AQ9Y4C1 1321 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 SPATA31C1P0DKV0 1188 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 SPATA33Q96N06 139 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 HPSEQ9Y251 543 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 P4HBP07237 508 aaKnown RBP14.93□□□□□ -0.02
USP44-202ENST00000393091 HSDL1Q3SXM5 330 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 BRDTQ58F21 947 aaPredicted RBP14.93□□□□□ -0.02
USP44-202ENST00000393091 RNF180Q86T96 592 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 KAT2BQ92831 832 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 PYM1Q9BRP8 204 aaKnown RBP14.93□□□□□ -0.02
USP44-202ENST00000393091 KATNAL1Q9BW62 490 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 SMARCAD1Q9H4L7 1026 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 SPC25Q9HBM1 224 aa14.93□□□□□ -0.02
USP44-202ENST00000393091 EML1O00423 815 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 FAM160B1Q5W0V3 765 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 FAM173BQ6P4H8 233 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 COPS5Q92905 334 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 MLXIPQ9HAP2 919 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 DISC1Q9NRI5 854 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 CMA1P23946 247 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 ADAM17P78536 824 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 MTFR1Q15390 333 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 HAUS3Q68CZ6 603 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 ERMNQ8TAM6 284 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 FAM167AQ96KS9 214 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 BCAS3Q9H6U6 928 aa14.92□□□□□ -0.02
USP44-202ENST00000393091 USP25Q9UHP3 1055 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms