RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 ITGB3BPQ13352 177 aaPredicted RBP13.47□□□□□ -0.25
RFC4-202ENST00000392481 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
RFC4-202ENST00000392481 TRIM50Q86XT4 487 aa13.47□□□□□ -0.25
RFC4-202ENST00000392481 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
RFC4-202ENST00000392481 NECAB1Q8N987 351 aa13.47□□□□□ -0.25
RFC4-202ENST00000392481 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
RFC4-202ENST00000392481 SCLYQ96I15 445 aa13.47□□□□□ -0.25
RFC4-202ENST00000392481 ORC3Q9UBD5 711 aaPredicted RBP13.47□□□□□ -0.25
RFC4-202ENST00000392481 KAT6AQ92794 2004 aa13.46□□□□□ -0.25
RFC4-202ENST00000392481 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 M0R2N6 131 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 IPO5O00410 1097 aaKnown RBP13.46□□□□□ -0.26
RFC4-202ENST00000392481 LARGE1O95461 756 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 FGBP02675 491 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 PFKMP08237 780 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 IQCF3P0C7M6 154 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 GNAT1P11488 350 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 XBP1P17861 261 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 RBM25P49756 843 aaKnown RBP13.46□□□□□ -0.26
RFC4-202ENST00000392481 USP11P51784 963 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.26
RFC4-202ENST00000392481 HIC1Q14526 733 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 NPY5RQ15761 445 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 RASIP1Q5U651 963 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 SERINC5Q86VE9 423 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 WASF1Q92558 559 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 DHX38Q92620 1227 aaKnown RBP13.46□□□□□ -0.26
RFC4-202ENST00000392481 VWCEQ96DN2 955 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 KIF2CQ99661 725 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 RNPEPQ9H4A4 650 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 SMARCAD1Q9H4L7 1026 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 ERAP1Q9NZ08 941 aa13.46□□□□□ -0.26
RFC4-202ENST00000392481 EMSYQ7Z589 1322 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 LGR5O75473 907 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 SELPP16109 830 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 ACTR2P61160 394 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 SMAD3P84022 425 aaKnown RBP13.45□□□□□ -0.26
RFC4-202ENST00000392481 ZNF200P98182 395 aaPredicted RBP13.45□□□□□ -0.26
RFC4-202ENST00000392481 HERVK_113Q902F9 699 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 GLG1Q92896 1179 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 ATP6V0A1Q93050 837 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 MTIF3Q9H2K0 278 aaKnown RBP13.45□□□□□ -0.26
RFC4-202ENST00000392481 KCNJ14Q9UNX9 436 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 LIMCH1Q9UPQ0 1083 aa13.45□□□□□ -0.26
RFC4-202ENST00000392481 SCN5AQ14524 2016 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 NRCAMQ92823 1304 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 DHX15O43143 795 aaKnown RBP13.44□□□□□ -0.26
RFC4-202ENST00000392481 EDIL3O43854 480 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 ATG7O95352 703 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 PARNO95453 639 aaKnown RBP13.44□□□□□ -0.26
RFC4-202ENST00000392481 CKBP12277 381 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 FDPSP14324 419 aaKnown RBP13.44□□□□□ -0.26
RFC4-202ENST00000392481 TRIM71Q2Q1W2 868 aaKnown RBP13.44□□□□□ -0.26
RFC4-202ENST00000392481 PRR16Q569H4 304 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 FAM109BQ6ICB4 259 aaPredicted RBP13.44□□□□□ -0.26
RFC4-202ENST00000392481 KRT25Q7Z3Z0 450 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 NSUN7Q8NE18 718 aaKnown RBP13.44□□□□□ -0.26
RFC4-202ENST00000392481 TBCKQ8TEA7 893 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 LENG9Q96B70 501 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 PCYT2Q99447 389 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 ZNF577Q9BSK1 485 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 AZI2Q9H6S1 392 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 TBC1D22BQ9NU19 505 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 SETD4Q9NVD3 440 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 TET1Q8NFU7 2136 aa13.44□□□□□ -0.26
RFC4-202ENST00000392481 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.43□□□□□ -0.26
RFC4-202ENST00000392481 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.43□□□□□ -0.26
RFC4-202ENST00000392481 TREHO43280 583 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 DTNBO60941 627 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 CCNE2O96020 404 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 ADAM17P78536 824 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 NONOQ15233 471 aaKnown RBP eCLIP13.43□□□□□ -0.26
RFC4-202ENST00000392481 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 OTOP2Q7RTS6 562 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 PLPPR4Q7Z2D5 763 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 DEFB128Q7Z7B8 93 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 LMBR1Q8WVP7 490 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 WNT8BQ93098 351 aa13.43□□□□□ -0.26
RFC4-202ENST00000392481 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
RFC4-202ENST00000392481 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 IGKV6D-21A0A0A0MT36 114 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 DDX39AO00148 427 aaKnown RBP13.42□□□□□ -0.26
RFC4-202ENST00000392481 CYP3A7P24462 503 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 MARK3P27448 753 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 SLC26A2P50443 739 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 STAT5BP51692 787 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 ZNF746Q6NUN9 644 aaPredicted RBP13.42□□□□□ -0.26
RFC4-202ENST00000392481 ABHD15Q6UXT9 468 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 DEFB123Q8N688 67 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 TNPO1Q92973 898 aaKnown RBP13.42□□□□□ -0.26
RFC4-202ENST00000392481 ZSCAN31Q96LW9 406 aaPredicted RBP13.42□□□□□ -0.26
RFC4-202ENST00000392481 GJB4Q9NTQ9 266 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 CXXC1Q9P0U4 656 aaPredicted RBP13.42□□□□□ -0.26
RFC4-202ENST00000392481 CHD9Q3L8U1 2897 aa13.42□□□□□ -0.26
RFC4-202ENST00000392481 CCDC194A0A1B0GVG4 234 aa13.41□□□□□ -0.26
RFC4-202ENST00000392481 JAK2O60674 1132 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms