RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ERLIN1O75477 346 aa22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 SEMA3FQ13275 785 aa22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 ORC2Q13416 577 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 CABP7Q86V35 215 aa22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 RBM46Q8TBY0 533 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 C12orf42Q96LP6 360 aa22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 LRWD1Q9UFC0 647 aa22.07■■□□□ 1.12
CSNK1D-203ENST00000392334 SREBF1P36956 1147 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 CCT6AP40227 531 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 MKRN3Q13064 507 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 SH3D19Q5HYK7 790 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 TREML2Q5T2D2 321 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 ACRBPQ8NEB7 543 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 LRRC15Q8TF66 581 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 NELFBQ8WX92 580 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 EXOC4Q96A65 974 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 RIPK3Q9Y572 518 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 PCNTO95613 3336 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 PARP14Q460N5 1801 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 KCNJ18B7U540 433 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 GCFC2P16383 781 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 ZNF76P36508 570 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 KCNJ12Q14500 433 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 CLEC4DQ8WXI8 215 aa22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 PUF60Q9UHX1 559 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-203ENST00000392334 PEX10O60683 326 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 RPN1P04843 607 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 HNRNPH2P55795 449 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 FKBP1BP68106 108 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 PPIL2Q13356 520 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 TMEM266Q2M3C6 531 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 NAALADL2Q58DX5 795 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 HDXQ7Z353 690 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 MMTAG2Q9BU76 263 aaKnown RBP22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 PCDHA12Q9UN75 941 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 RLFQ13129 1914 aa22.05■■□□□ 1.12
CSNK1D-203ENST00000392334 AMPD2Q01433 879 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 COG2Q14746 738 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 GADL1Q6ZQY3 521 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 CATSPERGQ6ZRH7 1159 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 AK8Q96MA6 479 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 NUDT12Q9BQG2 462 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 GBP3Q9H0R5 595 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 VPS16Q9H269 839 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 ZCCHC17Q9NP64 241 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 COL20A1Q9P218 1284 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 CYP3A7-CYP3A51PA0A087WV96 503 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 A0A0G2JLL6 359 aaPredicted RBP22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 PLCG1P19174 1290 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 CYP3A7P24462 503 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 DSG3P32926 999 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 FXR2P51116 673 aaKnown RBP eCLIP22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 SLC30A10Q6XR72 485 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 PRRT2Q7Z6L0 340 aaPredicted RBP22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 TRERF1Q96PN7 1200 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 PNKPQ96T60 521 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 CCSER1Q9C0I3 900 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 ZSWIM4Q9H7M6 989 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 TAB2Q9NYJ8 693 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 L1RE1Q9UN81 338 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 KCNH4Q9UQ05 1017 aa22.04■■□□□ 1.12
CSNK1D-203ENST00000392334 A0A1W2PQC6 194 aa22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 CTAGE15A4D2H0 777 aa22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 RNF225M0QZC1 329 aaPredicted RBP22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 CTAGE8P0CG41 777 aa22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 MCTP2Q6DN12 878 aa22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 CTAGE6Q86UF2 777 aa22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 CTAGE4Q8IX94 777 aa22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 PURBQ96QR8 312 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-203ENST00000392334 H3BQF6 201 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 TULP2O00295 520 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 CXCL11O14625 94 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 MYL1P05976 194 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 KRT9P35527 623 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 STAT3P40763 770 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 HUNKP57058 714 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 PLS1Q14651 629 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 KCNB1Q14721 858 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 SNRNP48Q6IEG0 339 aaKnown RBP22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 LENG9Q96B70 501 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 NAP1L4Q99733 375 aaKnown RBP22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 KCNMB3Q9NPA1 279 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 PASKQ96RG2 1323 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 TMEM132BQ14DG7 1078 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 ZNF662Q6ZS27 426 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 ADSSL1Q8N142 457 aa22.02■■□□□ 1.12
CSNK1D-203ENST00000392334 EIF3JO75822 258 aaKnown RBP22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 PRCPP42785 496 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 MOGSQ13724 837 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 NSMFQ6X4W1 530 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 IRF2BP1Q8IU81 584 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 SNX29Q8TEQ0 813 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 EPN1Q9Y6I3 576 aaPredicted RBP22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 COL11A1P12107 1806 aaPredicted RBP22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 LOC285556D6RIA3 1793 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 EEF1GP26641 437 aaKnown RBP22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 HSD17B4P51659 736 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 Q4G0T1 1027 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 NEK11Q8NG66 645 aa22.01■■□□□ 1.11
CSNK1D-203ENST00000392334 ETNPPLQ8TBG4 499 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms