RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 TCP11X2Q5H9J9 407 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 CENPPQ6IPU0 288 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 FOXR2Q6PJQ5 311 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 TRIM47Q96LD4 638 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 CYP39A1Q9NYL5 469 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 PYCARDQ9ULZ3 195 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 CCND2P30279 289 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 KCNJ12Q14500 433 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 PLS1Q14651 629 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 ARID5BQ14865 1188 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 KRT31Q15323 416 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 FILIP1LQ4L180 1135 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 VSIG10LQ86VR7 867 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 NSUN6Q8TEA1 469 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 DYDC2Q96IM9 177 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 TBC1D22BQ9NU19 505 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 KIAA1217Q5T5P2 1943 aa12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 MYCLP12524 364 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 EEF1GP26641 437 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 ITGB3BPQ13352 177 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 CTTNQ14247 550 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 FAM26FQ5R3K3 315 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 LDLRAD1Q5T700 205 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 SPECC1LQ69YQ0 1117 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 AGTPBP1Q9UPW5 1226 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 PCDHA2Q9Y5H9 948 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 NR3C2P08235 984 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 TBX2Q13207 712 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 GIT2Q14161 759 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 ARMCX5Q6P1M9 558 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 RIOX2Q8IUF8 465 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 TPH2Q8IWU9 490 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 CSGALNACT2Q8N6G5 542 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 SRRTQ9BXP5 876 aaKnown RBP12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 BHMT2Q9H2M3 363 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
SMARCAL1-203ENST00000392128 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 MAFGO15525 162 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 SFPQP23246 707 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 PBX1P40424 430 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 COPB1P53618 953 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 CCZ1BP86790 482 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 CCZ1P86791 482 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 GPRASP2Q96D09 838 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 SPTLC3Q9NUV7 552 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 BTBD7Q9P203 1132 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 STAM2O75886 525 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 MOGSQ13724 837 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 FASTKD5Q7L8L6 764 aaKnown RBP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 MIER3Q7Z3K6 550 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 FAM114A1Q8IWE2 563 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 INPP4AQ96PE3 977 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 REEP2Q9BRK0 252 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 LXNQ9BS40 222 aa12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 ASCC2Q9H1I8 757 aaPredicted RBP12.72□□□□□ -0.37
SMARCAL1-203ENST00000392128 PFASO15067 1338 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 DDX39AO00148 427 aaKnown RBP12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 TEX33O43247 280 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 NOLC1Q14978 699 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 HERC4Q5GLZ8 1057 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 RINT1Q6NUQ1 792 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 NLRX1Q86UT6 975 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 DNERQ8NFT8 737 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 RUSC1Q9BVN2 902 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 SPATC1LQ9H0A9 340 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 KCND2Q9NZV8 630 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 WRAP73Q9P2S5 460 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 MAGEC2Q9UBF1 373 aaPredicted RBP12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 WDR81Q562E7 1941 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.37
SMARCAL1-203ENST00000392128 N4BP3O15049 544 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 KIF20AO95235 890 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 SKILP12757 684 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 HERVK_113P62684 666 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 IWS1Q96ST2 819 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.38
SMARCAL1-203ENST00000392128 FGFR1OPO95684 399 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms