RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 GRIN1Q05586 938 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SSRP1Q08945 709 aaKnown RBP2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 RAB33AQ14088 237 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 USP10Q14694 798 aaKnown RBP2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SF1Q15637 639 aaKnown RBP2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 CRY1Q16526 586 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 PAN2Q504Q3 1202 aaKnown RBP2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 ZMAT1Q5H9K5 638 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 PRR31Q5SQ13 230 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SOGA3Q5TF21 947 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 BTBD8Q5XKL5 378 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 MRM1Q6IN84 353 aaKnown RBP2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 STYK1Q6J9G0 422 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 Q6ZUG5 572 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 KCTD1Q719H9 257 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 DTX3Q8N9I9 347 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 UHMK1Q8TAS1 419 aaKnown RBP2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 IGDCC4Q8TDY8 1250 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 FBXW5Q969U6 566 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SCYL1Q96KG9 808 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 LMF1Q96S06 567 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 GMLQ99445 158 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 TINF2Q9BSI4 451 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SPATA9Q9BWV2 254 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 TANGO6Q9C0B7 1094 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SEC61A2Q9H9S3 476 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 SIRPGQ9P1W8 387 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 ZFP69BQ9UJL9 534 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 FBXO10Q9UK96 956 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 TSC22D4Q9Y3Q8 395 aa2.05□□□□□ -2.08
SNORD28B-201ENST00000390993 TRBV23-1A0A0A0MS06 115 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 MUSKO15146 869 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 PDPK1O15530 556 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 B4GALT3O60512 393 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 EFCAB14O75071 495 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 FZD7O75084 574 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 HIP1RO75146 1068 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 CKMP06732 381 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 COL6A2P12110 1019 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 MLLT6P55198 1093 aaPredicted RBP2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 GABREP78334 506 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 ZXDAP98168 799 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 NFKB2Q00653 900 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 PFKPQ01813 784 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 GUCY1A3Q02108 690 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 HHEXQ03014 270 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 MAP3K12Q12852 859 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 RASGRF1Q13972 1273 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 PRKD1Q15139 912 aaPredicted RBP2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 GPR19Q15760 415 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 WDR72Q3MJ13 1102 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 FIGNQ5HY92 759 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 CD276Q5ZPR3 534 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 PKN3Q6P5Z2 889 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 LIMS2Q7Z4I7 341 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 GGNQ86UU5 652 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 CALML6Q8TD86 181 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 MICAL1Q8TDZ2 1067 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 SH3RF3Q8TEJ3 882 aaPredicted RBP2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 ZCCHC14Q8WYQ9 949 aaKnown RBP2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 PTPRN2Q92932 1015 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 E2F7Q96AV8 911 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 FAM89AQ96GI7 184 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 C1orf159Q96HA4 380 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 RBM15Q96T37 977 aaKnown RBP eCLIP2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 C1QTNF3Q9BXJ4 246 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 CARD11Q9BXL7 1154 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 ZNF341Q9BYN7 854 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 KRTAP9-3Q9BYQ3 159 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 KLC2Q9H0B6 622 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 CCDC113Q9H0I3 377 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 C12orf65Q9H3J6 166 aaKnown RBP2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 MSL2Q9HCI7 577 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 RIC8BQ9NVN3 520 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 ST6GALNAC2Q9UJ37 374 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 FBXL7Q9UJT9 491 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 ADAM29Q9UKF5 820 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 ATP23Q9Y6H3 246 aa2.04□□□□□ -2.08
SNORD28B-201ENST00000390993 CCDC163A0A0D9SF12 145 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 PRAMEF25A6NGN4 478 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 CCDC85CA6NKD9 419 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ZNF839A8K0R7 811 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 CYR61O00622 381 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 MAFGO15525 162 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 KLF4O43474 513 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 MSCO60682 206 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 ZNF623O75123 536 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 FSHBP01225 129 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 KRT15P19012 456 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 TACR2P21452 398 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 POLD1P28340 1107 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 GRIA2P42262 883 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 MEOX1P50221 254 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 EPHA5P54756 1037 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 CYP4F3Q08477 520 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 SF3A1Q15459 793 aaKnown RBP2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 LONRF2Q1L5Z9 754 aa2.03□□□□□ -2.08
SNORD28B-201ENST00000390993 NAALADL2Q58DX5 795 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms