RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 ERLIN2O94905 339 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 JMJD4Q9H9V9 463 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 BMP2KQ9NSY1 1161 aaPredicted RBP23.07■■□□□ 1.28
COL23A1-201ENST00000390654 MTMR4Q9NYA4 1195 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 BCCIPQ9P287 314 aaKnown RBP eCLIP23.07■■□□□ 1.28
COL23A1-201ENST00000390654 LEMD3Q9Y2U8 911 aa23.07■■□□□ 1.28
COL23A1-201ENST00000390654 POTEFA5A3E0 1075 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 TMCO5BA8MYB1 307 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 CEP104O60308 925 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 POTEIP0CG38 1075 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 RHBDL3P58872 404 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 POTEGQ6S5H5 508 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 POTEEQ6S8J3 1075 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 GRID2IPA4D2P6 1211 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 CEP85LQ5SZL2 805 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 IKZF4Q9H2S9 585 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 RIC8AQ9NPQ8 531 aa23.06■■□□□ 1.28
COL23A1-201ENST00000390654 SSU72P8A0A1W2PR75 194 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 PLA2G4BP0C869 781 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 PTK2Q05397 1052 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 KCNH2Q12809 1159 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SEMA3FQ13275 785 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SLC30A10Q6XR72 485 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SCFD1Q8WVM8 642 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SPAG5Q96R06 1193 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 EMILIN3Q9NT22 766 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 ZNF219Q9P2Y4 722 aaPredicted RBP23.05■■□□□ 1.28
COL23A1-201ENST00000390654 COL22A1Q8NFW1 1626 aaPredicted RBP23.05■■□□□ 1.28
COL23A1-201ENST00000390654 TCP10Q12799 353 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SF3A3Q12874 501 aaKnown RBP eCLIP23.05■■□□□ 1.284e-13■■■■■ 213.1
COL23A1-201ENST00000390654 NAB2Q15742 525 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 ASIC2Q16515 512 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SLC18A3Q16572 532 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 ZCWPW2Q504Y3 356 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 SAMD1Q6SPF0 538 aaPredicted RBP23.05■■□□□ 1.28
COL23A1-201ENST00000390654 ZNF572Q7Z3I7 529 aaPredicted RBP23.05■■□□□ 1.28
COL23A1-201ENST00000390654 ALS2CLQ60I27 953 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 GJB7Q6PEY0 223 aa23.05■■□□□ 1.28
COL23A1-201ENST00000390654 CCDC88AQ3V6T2 1871 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 A0A087WUV0 522 aaPredicted RBP23.04■■□□□ 1.28
COL23A1-201ENST00000390654 GPR75-ASB3A0A0A6YYF3 556 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 NR2F2P24468 414 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 GTF2A1P52655 376 aaPredicted RBP23.04■■□□□ 1.28
COL23A1-201ENST00000390654 ITIH3Q06033 890 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 PAK2Q13177 524 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 TMEM119Q4V9L6 283 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 LRRC4BQ9NT99 713 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 PSMC6P62333 389 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 PABPC4Q13310 644 aaKnown RBP eCLIP23.04■■□□□ 1.28
COL23A1-201ENST00000390654 COBLL1Q53SF7 1204 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 PIK3R5Q8WYR1 880 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 TAF4BQ92750 862 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 PSTPIP2Q9H939 334 aa23.04■■□□□ 1.28
COL23A1-201ENST00000390654 PDIA5Q14554 519 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 RNF10Q8N5U6 811 aaKnown RBP23.03■■□□□ 1.28
COL23A1-201ENST00000390654 CAVIN3Q969G5 261 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 IQCDQ96DY2 449 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 DDX47Q9H0S4 455 aaKnown RBP23.03■■□□□ 1.28
COL23A1-201ENST00000390654 PPANQ9NQ55 473 aaKnown RBP23.03■■□□□ 1.28
COL23A1-201ENST00000390654 DDX4Q9NQI0 724 aaKnown RBP23.03■■□□□ 1.28
COL23A1-201ENST00000390654 PLAAQ9Y263 795 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 MEI1Q5TIA1 1274 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 ADAT2Q7Z6V5 191 aaKnown RBP23.03■■□□□ 1.28
COL23A1-201ENST00000390654 IQCKQ8N0W5 287 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 GDF3Q9NR23 364 aa23.03■■□□□ 1.28
COL23A1-201ENST00000390654 INPP5BP32019 993 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 CYP4A11Q02928 519 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 NAA35Q5VZE5 725 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 ZNF571Q7Z3V5 609 aaPredicted RBP23.02■■□□□ 1.28
COL23A1-201ENST00000390654 TRIM59Q8IWR1 403 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 TRIM31Q9BZY9 425 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 SFI1A8K8P3 1242 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 ICE2Q659A1 982 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 DAGLAQ9Y4D2 1042 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 PCDHAC2Q9Y5I4 1007 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 LAMB2P55268 1798 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 CLIC2O15247 247 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 MED24O75448 989 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 NR1D1P20393 614 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 RPS6KA1Q15418 735 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 RNF187Q5TA31 235 aaPredicted RBP23.02■■□□□ 1.28
COL23A1-201ENST00000390654 CCDC65Q8IXS2 484 aa23.02■■□□□ 1.28
COL23A1-201ENST00000390654 INPP4AQ96PE3 977 aaPredicted RBP23.02■■□□□ 1.28
COL23A1-201ENST00000390654 SERPINB2P05120 415 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 ERVK-9P63128 1117 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 CUL5Q93034 780 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 EFCC1Q9HA90 598 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 CAPN7Q9Y6W3 813 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 LSP1P33241 339 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 PSMD2Q13200 908 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 GBP6Q6ZN66 633 aa23.01■■□□□ 1.27
COL23A1-201ENST00000390654 ESYT2A0FGR8 921 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 MYO1FO00160 1098 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 ITGA4P13612 1032 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 LUC7LQ9NQ29 371 aaKnown RBP23■■□□□ 1.27
COL23A1-201ENST00000390654 USP21Q9UK80 565 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 HDAC9Q9UKV0 1011 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 H0YHG0 523 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 CYP11B2P19099 503 aa23■■□□□ 1.27
COL23A1-201ENST00000390654 KCNA1Q09470 495 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms