RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
TRAV18-201ENST00000390446 UBA1P22314 1058 aaKnown RBP11.31□□□□□ -0.6
TRAV18-201ENST00000390446 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 MCTP2Q6DN12 878 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 FRMD5Q7Z6J6 570 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 PDCD2LQ9BRP1 358 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 AMNQ9BXJ7 453 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 AAASQ9NRG9 546 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 PCDHB12Q9Y5F1 795 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 RALGAPA2Q2PPJ7 1873 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 TTC41PQ6P2S7 1318 aa11.31□□□□□ -0.6
TRAV18-201ENST00000390446 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 M0QZ92 97 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 CHRNA1P02708 482 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 PARP1P09874 1014 aaKnown RBP11.3□□□□□ -0.6
TRAV18-201ENST00000390446 HOXD8P13378 290 aaPredicted RBP11.3□□□□□ -0.6
TRAV18-201ENST00000390446 DNAJB1P25685 340 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 HOXA13P31271 388 aaPredicted RBP11.3□□□□□ -0.6
TRAV18-201ENST00000390446 NBL1P41271 181 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 TECP42680 631 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 SP2Q02086 613 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 CAMK1Q14012 370 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 NEDD9Q14511 834 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 PGM5Q15124 567 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 GNPTABQ3T906 1256 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 CCDC178Q5BJE1 867 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 FAM26DQ5JW98 314 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 CYFIP1Q7L576 1253 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 IQCA1Q86XH1 822 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 CMTR2Q8IYT2 770 aaKnown RBP11.3□□□□□ -0.6
TRAV18-201ENST00000390446 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 ESR2Q92731 530 aa11.3□□□□□ -0.6
TRAV18-201ENST00000390446 RNF41Q9H4P4 317 aaPredicted RBP11.3□□□□□ -0.6
TRAV18-201ENST00000390446 FGAP02671 866 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 LPIN1Q14693 890 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 LLGL2Q6P1M3 1020 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 TAF2Q6P1X5 1199 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 VSIG10LQ86VR7 867 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 THNSL1Q8IYQ7 743 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 LMBR1Q8WVP7 490 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 ZNF689Q96CS4 500 aaPredicted RBP11.29□□□□□ -0.6
TRAV18-201ENST00000390446 SUPT16HQ9Y5B9 1047 aaKnown RBP11.29□□□□□ -0.6
TRAV18-201ENST00000390446 PCDHGC5Q9Y5F6 944 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 PCDHA1Q9Y5I3 950 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 NRCAMQ92823 1304 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
TRAV18-201ENST00000390446 COL4A6Q14031 1691 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 GCOM1H8Y6P7 765 aaPredicted RBP11.28□□□□□ -0.6
TRAV18-201ENST00000390446 RGS20O76081 388 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 GLP2RO95838 553 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 FGRP09769 529 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 LINC00271P0C7V0 271 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 POLR2MP0CAP2 368 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 CA8P35219 290 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 RBM10P98175 930 aaKnown RBP11.28□□□□□ -0.6
TRAV18-201ENST00000390446 ALX1Q15699 326 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 TSHZ1Q6ZSZ6 1077 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 DGKHQ86XP1 1220 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 TRIM50Q86XT4 487 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 NPAS4Q8IUM7 802 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 FLCNQ8NFG4 579 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 DNAJB3Q8WWF6 145 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.6
TRAV18-201ENST00000390446 CDCA3Q99618 268 aaPredicted RBP11.28□□□□□ -0.6
TRAV18-201ENST00000390446 HINFPQ9BQA5 517 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 TMEM260Q9NX78 707 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 MAP3K20Q9NYL2 800 aaKnown RBP11.28□□□□□ -0.6
TRAV18-201ENST00000390446 RTEL1Q9NZ71 1219 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 KIAA1217Q5T5P2 1943 aa11.28□□□□□ -0.6
TRAV18-201ENST00000390446 KMT2EQ8IZD2 1858 aa11.27□□□□□ -0.6
TRAV18-201ENST00000390446 STK25O00506 426 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
TRAV18-201ENST00000390446 CD52P31358 61 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 HSD17B4P51659 736 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 IGBP1P78318 339 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 TRAF1Q13077 416 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 PPFIA1Q13136 1202 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 IER5Q5VY09 327 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 ASTLQ6HA08 431 aaPredicted RBP11.27□□□□□ -0.61
TRAV18-201ENST00000390446 CES5AQ6NT32 575 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 RUFY4Q6ZNE9 571 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 STOX1Q6ZVD7 989 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 TMEM105Q8N8V8 129 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 TMEM87AQ8NBN3 555 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 GLG1Q92896 1179 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 GPR20Q99678 358 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 FTHL17Q9BXU8 183 aa11.27□□□□□ -0.61
TRAV18-201ENST00000390446 FAM49AQ9H0Q0 323 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms