RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SLC12A3P55017 1021 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ERVK-24P63145 666 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 STK4Q13043 487 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ANKRD13CQ8N6S4 541 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 DNAJC19Q96DA6 116 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 PTPN18Q99952 460 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 POLD4Q9HCU8 107 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 DNM3Q9UQ16 869 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 PFASO15067 1338 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 MCM3APO60318 1980 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 SOWAHBA6NEL2 793 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ALDH5A1P51649 535 aaPredicted RBP13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ARSHQ5FYA8 562 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 MIER3Q7Z3K6 550 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 GIMAP8Q8ND71 665 aaPredicted RBP13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 INPP4AQ96PE3 977 aaPredicted RBP13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 SLC39A2Q9NP94 309 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 SAMSN1Q9NSI8 373 aaKnown RBP13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 PNMA3Q9UL41 463 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 TELO2Q9Y4R8 837 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 SAMM50Q9Y512 469 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
SPTBN1-203ENST00000389980 SLC26A4O43511 780 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 SLC25A27O95847 323 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 CYP11B2P19099 503 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 MSNP26038 577 aaKnown RBP13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 EPHA7Q15375 998 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 XRRA1Q6P2D8 792 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 SARM1Q6SZW1 724 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 UNC13DQ70J99 1090 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 ZNF830Q96NB3 372 aaPredicted RBP13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 LXNQ9BS40 222 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 BHMT2Q9H2M3 363 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 TUFT1Q9NNX1 390 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
SPTBN1-203ENST00000389980 TRIM49BA6NDI0 452 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 CCNE2O96020 404 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 ZBTB48P10074 688 aaPredicted RBP13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 ZNF157P51786 506 aaPredicted RBP13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 TPM4P67936 248 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 ADSSL1Q8N142 457 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 FAM133AQ8N9E0 248 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 KIAA0895Q8NCT3 520 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 GLIS3Q8NEA6 775 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 DNERQ8NFT8 737 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 GPRASP2Q96D09 838 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 TBC1D22BQ9NU19 505 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 IFNKQ9P0W0 207 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 SP4Q02446 784 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 PAK1Q13153 545 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 STXBP2Q15833 593 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 EEPD1Q7L9B9 569 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 TRMT1LQ7Z2T5 733 aaKnown RBP13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 ANKRD23Q86SG2 305 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 SYT2Q8N9I0 419 aaPredicted RBP13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 CCDC47Q96A33 483 aaKnown RBP13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 MMP19Q99542 508 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 RUSC1Q9BVN2 902 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 LRRC27Q9C0I9 530 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 TBC1D7Q9P0N9 293 aa13.59□□□□□ -0.23
SPTBN1-203ENST00000389980 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 KCNA2P16389 499 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 FANCCQ00597 558 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 SP2Q02086 613 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 COASYQ13057 564 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 GPRC5AQ8NFJ5 357 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 FGD4Q96M96 766 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 XPO4Q9C0E2 1151 aaKnown RBP13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 BMP2KQ9NSY1 1161 aaPredicted RBP13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 PANK4Q9NVE7 773 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 CENPFP49454 3210 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 EYA4O95677 639 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 KCTD2Q14681 263 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 LRRC41Q15345 812 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 UGCGQ16739 394 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 HS1BP3Q53T59 392 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 SPATA1Q5VX52 437 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 RASAL3Q86YV0 1011 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 DRC7Q8IY82 874 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 MAF1Q9H063 256 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
SPTBN1-203ENST00000389980 EIF3JO75822 258 aaKnown RBP13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 ZNF18P17022 549 aa13.57□□□□□ -0.24
SPTBN1-203ENST00000389980 EHHADHQ08426 723 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms