RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 TUBB4AP04350 444 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 CASP14P31944 242 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 LRRC41Q15345 812 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 CATSPERGQ6ZRH7 1159 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 RBM46Q8TBY0 533 aaKnown RBP27.97■■■□□ 2.07
SHOX2-201ENST00000389589 NEK9Q8TD19 979 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 DYDC2Q96IM9 177 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 BHMT2Q9H2M3 363 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 UNC45AQ9H3U1 944 aa27.97■■■□□ 2.07
SHOX2-201ENST00000389589 ZSCAN12O43309 604 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 CPLX3Q8WVH0 158 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 KCNH7Q9NS40 1196 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 RNF146Q9NTX7 359 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 MYPNQ86TC9 1320 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 PAPPA2Q9BXP8 1791 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 PTPRFP10586 1907 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 MAP3K9P80192 1104 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 CTTNQ14247 550 aaKnown RBP27.96■■■□□ 2.07
SHOX2-201ENST00000389589 TKFCQ3LXA3 575 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 SH3D19Q5HYK7 790 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 CEP135Q66GS9 1140 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 SULF1Q8IWU6 871 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 TPH2Q8IWU9 490 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 IL31RAQ8NI17 732 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 TAAR1Q96RJ0 339 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 MAF1Q9H063 256 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 JADE2Q9NQC1 790 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 PAXBP1Q9Y5B6 917 aa27.96■■■□□ 2.07
SHOX2-201ENST00000389589 PES1O00541 588 aaKnown RBP27.95■■■□□ 2.07
SHOX2-201ENST00000389589 ATP2A1O14983 1001 aa27.95■■■□□ 2.07
SHOX2-201ENST00000389589 GLIS3Q8NEA6 775 aa27.95■■■□□ 2.07
SHOX2-201ENST00000389589 ZFP91Q96JP5 570 aaPredicted RBP27.95■■■□□ 2.07
SHOX2-201ENST00000389589 NACC1Q96RE7 527 aa27.95■■■□□ 2.07
SHOX2-201ENST00000389589 REEP2Q9BRK0 252 aa27.95■■■□□ 2.07
SHOX2-201ENST00000389589 NOC4LQ9BVI4 516 aaKnown RBP27.95■■■□□ 2.07
SHOX2-201ENST00000389589 CACNB1Q02641 598 aaPredicted RBP27.95■■■□□ 2.06
SHOX2-201ENST00000389589 PGM5Q15124 567 aa27.95■■■□□ 2.06
SHOX2-201ENST00000389589 ZCWPW2Q504Y3 356 aa27.95■■■□□ 2.06
SHOX2-201ENST00000389589 XRRA1Q6P2D8 792 aa27.95■■■□□ 2.06
SHOX2-201ENST00000389589 SLC30A10Q6XR72 485 aa27.95■■■□□ 2.06
SHOX2-201ENST00000389589 WNK4Q96J92 1243 aa27.95■■■□□ 2.06
SHOX2-201ENST00000389589 HOXC10Q9NYD6 342 aa27.95■■■□□ 2.06
SHOX2-201ENST00000389589 OTOFQ9HC10 1997 aa27.94■■■□□ 2.06
SHOX2-201ENST00000389589 FXR1P51114 621 aaKnown RBP eCLIP27.94■■■□□ 2.06
SHOX2-201ENST00000389589 RAD51AP2Q09MP3 1159 aa27.94■■■□□ 2.06
SHOX2-201ENST00000389589 RMDN3Q96TC7 470 aa27.94■■■□□ 2.06
SHOX2-201ENST00000389589 ZHX3Q9H4I2 956 aa27.94■■■□□ 2.06
SHOX2-201ENST00000389589 TBC1D7Q9P0N9 293 aa27.94■■■□□ 2.06
SHOX2-201ENST00000389589 B4DLN1 442 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 FECHP22830 423 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 MRPS9P82933 396 aaKnown RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 FKBP3Q00688 224 aaKnown RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 PRKG1Q13976 671 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 SNRNP48Q6IEG0 339 aaKnown RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 NSMFQ6X4W1 530 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 LRRC55Q6ZSA7 311 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 MYRIPQ8NFW9 859 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 AGO4Q9HCK5 861 aaKnown RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 PXMP2Q9NR77 195 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 SNCAIPQ9Y6H5 919 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 PPP1R12BO60237 982 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 EEF2KMTQ96G04 330 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 NUP58Q9BVL2 599 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 ZNF214Q9UL59 606 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-201ENST00000389589 COL4A3BPQ9Y5P4 624 aa27.93■■■□□ 2.06
SHOX2-201ENST00000389589 TBCAO75347 108 aaKnown RBP27.92■■■□□ 2.06
SHOX2-201ENST00000389589 GAP43P17677 238 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 EIF2AK2P19525 551 aaKnown RBP27.92■■■□□ 2.06
SHOX2-201ENST00000389589 TBC1D8BQ0IIM8 1120 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 MTMR1Q13613 665 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 VGLL4Q14135 290 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 MIIPQ5JXC2 388 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 FKBP15Q5T1M5 1219 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 C9orf131Q5VYM1 1079 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 RINT1Q6NUQ1 792 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 PPP4R3CPQ6ZMV5 832 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 SCFD1Q8WVM8 642 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 CEP63Q96MT8 703 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 PDCD2LQ9BRP1 358 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 TBC1D22BQ9NU19 505 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 KCND2Q9NZV8 630 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 RIPK3Q9Y572 518 aa27.92■■■□□ 2.06
SHOX2-201ENST00000389589 GOLGA6L9A6NEM1 432 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 ARHGEF16Q5VV41 709 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 RETREG2Q8NC44 543 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 RUSC1Q9BVN2 902 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 TEX13BQ9BXU2 312 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 CSADQ9Y600 493 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 UQCRHLA0A096LP55 91 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 UQCRHP07919 91 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 YBX3P16989 372 aaKnown RBP eCLIP27.91■■■□□ 2.06
SHOX2-201ENST00000389589 MAN2A1Q16706 1144 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 MIER3Q7Z3K6 550 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 PIGOQ8TEQ8 1089 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 FGFBP2Q9BYJ0 223 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 ABHD10Q9NUJ1 306 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 PPP2R2CQ9Y2T4 447 aa27.91■■■□□ 2.06
SHOX2-201ENST00000389589 DHX15O43143 795 aaKnown RBP27.9■■■□□ 2.06
SHOX2-201ENST00000389589 BAATQ14032 418 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms