RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 TYW1BQ6NUM6 668 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 KIAA1024Q9UPX6 916 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 DNM3Q9UQ16 869 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 MARF1Q9Y4F3 1742 aaKnown RBP20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 POTEMA6NI47 508 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 RHBDL3P58872 404 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 PARP9Q8IXQ6 854 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 PRPF38AQ8NAV1 312 aaKnown RBP20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 ZDHHC15Q96MV8 337 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 MMS19Q96T76 1030 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 SPON1Q9HCB6 807 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 LTBP4Q8N2S1 1624 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 SALL1Q9NSC2 1324 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 PPP1R12AO14974 1030 aaPredicted RBP20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 CFAP221Q4G0U5 840 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 CCDC65Q8IXS2 484 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 HOOK2Q96ED9 719 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 TCHHQ07283 1943 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 MEIS1O00470 390 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 TDP2O95551 362 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 PAX7P23759 505 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 GMPSP49915 693 aaPredicted RBP20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 ATP11AP98196 1134 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 DACT2Q5SW24 774 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 GADL1Q6ZQY3 521 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 FAM114A1Q8IWE2 563 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 NAP1L4Q99733 375 aaKnown RBP20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 EPB41L5Q9HCM4 733 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 IRAK4Q9NWZ3 460 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 ZHX2Q9Y6X8 837 aa20.63■□□□□ 0.89
PPFIA1-202ENST00000389547 SKAP2O75563 359 aaPredicted RBP20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 VIPAS39Q9H9C1 493 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 RCSD1Q6JBY9 416 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 PAIP2Q9BPZ3 127 aaKnown RBP20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 ACTR5Q9H9F9 607 aaPredicted RBP20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 SMIM24O75264 130 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 GCFC2P16383 781 aaKnown RBP20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 TRIML1Q8N9V2 468 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 TRIM58Q8NG06 486 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 MTFR1LQ9H019 292 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 MAD2L2Q9UI95 211 aa20.62■□□□□ 0.89
PPFIA1-202ENST00000389547 RPN1P04843 607 aaKnown RBP20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 COPB1P53618 953 aaKnown RBP20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 RASSF7Q02833 373 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 LMNTD2Q8IXW0 634 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 ANO3Q9BYT9 981 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 PLCG1P19174 1290 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 ERCC5P28715 1186 aaPredicted RBP20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 MORC3Q14149 939 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 FBF1Q8TES7 1133 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 FAM53CQ9NYF3 392 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 ATRNO75882 1429 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 PDS5AQ29RF7 1337 aaKnown RBP20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 PABPC4Q13310 644 aaKnown RBP eCLIP20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 MSANTD4Q8NCY6 345 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 FBXO41Q8TF61 875 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 LRRC45Q96CN5 670 aa20.61■□□□□ 0.89
PPFIA1-202ENST00000389547 ATP1A1P05023 1023 aaKnown RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 CNNM4Q6P4Q7 775 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 NOC4LQ9BVI4 516 aaKnown RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 TACC3Q9Y6A5 838 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 GTPBP6O43824 516 aaPredicted RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 MXRA7P84157 204 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 GPBP1Q86WP2 473 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 GJA10Q969M2 543 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 PAGE5Q96GU1 130 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 SPZ1Q9BXG8 430 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 AS3MTQ9HBK9 375 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 TRIM10Q9UDY6 481 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 HYOU1Q9Y4L1 999 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 BICDL2A1A5D9 508 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 BUB1O43683 1085 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 ECE1P42892 770 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 SEC24CP53992 1094 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 MKRN3Q13064 507 aaKnown RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 GRIPAP1Q4V328 841 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 SWT1Q5T5J6 900 aaKnown RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 TBC1D1Q86TI0 1168 aaPredicted RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 CCDC155Q8N6L0 562 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 ACER1Q8TDN7 264 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 DOT1LQ8TEK3 1739 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 IL17RAQ96F46 866 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 SH3GLB2Q9NR46 395 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 HERC5Q9UII4 1024 aaKnown RBP20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 PCDHA6Q9UN73 950 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 PCDHA8Q9Y5H6 950 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
PPFIA1-202ENST00000389547 IRX1P78414 480 aaPredicted RBP20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 NCAPHQ15003 741 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 CALR3Q96L12 384 aaKnown RBP20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 MYOZ2Q9NPC6 264 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 NFU1Q9UMS0 254 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 HEXIM1O94992 359 aaKnown RBP20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 ALS2CLQ60I27 953 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 HAUS2Q9NVX0 235 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 FBXO2Q9UK22 296 aaPredicted RBP20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 PTPROQ16827 1216 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 ENTPD3O75355 529 aa20.59■□□□□ 0.89
PPFIA1-202ENST00000389547 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.895e-9■■■■□ 22.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms