RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 TROVE2P10155 538 aaKnown RBP eCLIP16.1■□□□□ 0.17
LRRK1-201ENST00000388948 PRDX5P30044 214 aa16.1■□□□□ 0.17
LRRK1-201ENST00000388948 MXI1P50539 228 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 CACNA2D3Q8IZS8 1091 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 RNF217Q8TC41 542 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 DPH5Q9H2P9 285 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 HPCAL4Q9UM19 191 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 CDO1Q16878 200 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 GPATCH11Q8N954 259 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 TUBGCP2Q9BSJ2 902 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 ATP6V0A4Q9HBG4 840 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 ZFYVE28Q9HCC9 887 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 ZNF568Q3ZCX4 644 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 RPGRIP1Q96KN7 1286 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 GCNT4Q9P109 453 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 ABCC12Q96J65 1359 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 NDUFA8P51970 172 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 PDCD6IPQ8WUM4 868 aaKnown RBP16.09■□□□□ 0.17
LRRK1-201ENST00000388948 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
LRRK1-201ENST00000388948 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 EIF3CLB5ME19 914 aaKnown RBP16.09■□□□□ 0.17
LRRK1-201ENST00000388948 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
LRRK1-201ENST00000388948 EIF3CQ99613 913 aaKnown RBP16.09■□□□□ 0.17
LRRK1-201ENST00000388948 PIH1D3Q9NQM4 214 aaKnown RBP16.09■□□□□ 0.17
LRRK1-201ENST00000388948 PCDHA7Q9UN72 937 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 PCDHA6Q9UN73 950 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 PCDHA8Q9Y5H6 950 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 ABCB11O95342 1321 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 INHBAP08476 426 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 PPARGP37231 505 aaPredicted RBP16.08■□□□□ 0.17
LRRK1-201ENST00000388948 LMNB2Q03252 620 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 MMEL1Q495T6 779 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 ZNF667Q5HYK9 610 aa16.08■□□□□ 0.17
LRRK1-201ENST00000388948 ZNF589Q86UQ0 364 aaPredicted RBP16.08■□□□□ 0.17
LRRK1-201ENST00000388948 MRPL47Q9HD33 250 aaKnown RBP16.08■□□□□ 0.17
LRRK1-201ENST00000388948 ERVK-7P63135 1459 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CYP27B1O15528 508 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 GBP1P32455 592 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 NUDT18Q6ZVK8 323 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 FAM71BQ8TC56 605 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CELF1Q92879 486 aaKnown RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 SLC7A5P2Q9GIP4 190 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 ZNF302Q9NR11 478 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CYP2E1P05181 493 aaPredicted RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 ACCSLQ4AC99 568 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 SPATA1Q5VX52 437 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 PIGOQ8TEQ8 1089 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 SUDS3Q9H7L9 328 aaPredicted RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CPP00450 1065 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CTNNA1P35221 906 aaKnown RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 CC2D1AQ6P1N0 951 aaPredicted RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 DARS2Q6PI48 645 aaKnown RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 OSBP2Q969R2 916 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 HYOU1Q9Y4L1 999 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 LDHAP00338 332 aaKnown RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
LRRK1-201ENST00000388948 BRIP1Q9BX63 1249 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 DONSONQ9NYP3 566 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.16
LRRK1-201ENST00000388948 GPC4O75487 556 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 KRT1P04264 644 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 CPB1P15086 417 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 BANK1Q8NDB2 785 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 BEST2Q8NFU1 509 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 ZNF668Q96K58 619 aaPredicted RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 CYP21A2P08686 494 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 STAT3P40763 770 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 RABEP2Q9H5N1 569 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 ACAD9Q9H845 621 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 ZNRF3Q9ULT6 936 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 CDC25AP30304 524 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 BBOF1Q8ND07 529 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 HMGCS2P54868 508 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 VEPH1Q14D04 833 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 PPP1R2P3Q6NXS1 205 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 CDC26Q8NHZ8 85 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 PSPC1Q8WXF1 523 aaKnown RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 COPB2P35606 906 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 RASSF7Q02833 373 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 EMILIN3Q9NT22 766 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 FANCLQ9NW38 375 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 PASKQ96RG2 1323 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 NVLO15381 856 aaKnown RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 PTPN12Q05209 780 aaKnown RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 B4GALNT4Q76KP1 1039 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 RPAP3Q9H6T3 665 aaPredicted RBP16.07■□□□□ 0.16
LRRK1-201ENST00000388948 BCAP29Q9UHQ4 241 aa16.07■□□□□ 0.16
LRRK1-201ENST00000388948 TXNDC9O14530 226 aa16.06■□□□□ 0.16
LRRK1-201ENST00000388948 NR5A1Q13285 461 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms