RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SNX12Q9UMY4 172 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 MYH10P35580 1976 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 NPHP3-ACAD11A0A0J9YXS1 232 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 SPDYE3A6NKU9 549 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 SPATA31C1P0DKV0 1188 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 MAGEA1P43355 309 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 GIT2Q14161 759 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 RBM26Q5T8P6 1007 aaKnown RBP16.51■□□□□ 0.23
SCFD2-201ENST00000388940 DNM3Q9UQ16 869 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
SCFD2-201ENST00000388940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCFD2-201ENST00000388940 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 PIK3CDO00329 1044 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 GDF11O95390 407 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 SERPING1P05155 500 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
SCFD2-201ENST00000388940 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 FAM83BQ5T0W9 1011 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 RNF10Q8N5U6 811 aaKnown RBP16.5■□□□□ 0.23
SCFD2-201ENST00000388940 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
SCFD2-201ENST00000388940 PSME4Q14997 1843 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 CETN3O15182 167 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 TRAF1Q13077 416 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 ADAM9Q13443 819 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 CASP8Q14790 479 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 SLC9C1Q4G0N8 1177 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 SFMBT2Q5VUG0 894 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 EPM2AIP1Q7L775 607 aaPredicted RBP16.5■□□□□ 0.23
SCFD2-201ENST00000388940 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 CNKSR1Q969H4 720 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 ALS2CR12Q96Q35 445 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 POLR3CQ9BUI4 534 aaPredicted RBP16.5■□□□□ 0.23
SCFD2-201ENST00000388940 ZCCHC17Q9NP64 241 aaKnown RBP16.5■□□□□ 0.23
SCFD2-201ENST00000388940 JADE2Q9NQC1 790 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 CAPN6Q9Y6Q1 641 aa16.5■□□□□ 0.23
SCFD2-201ENST00000388940 FAM86B1E9PN63 330 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 H3BQF6 201 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 OPLAHO14841 1288 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 APBA3O96018 575 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 FAM86B2P0C5J1 330 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 CREG2Q8IUH2 290 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 CAPZA3Q96KX2 299 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 TDRD3Q9H7E2 651 aaKnown RBP16.49■□□□□ 0.23
SCFD2-201ENST00000388940 VIPAS39Q9H9C1 493 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 KIF13BQ9NQT8 1826 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 PDE2AO00408 941 aaPredicted RBP16.49■□□□□ 0.23
SCFD2-201ENST00000388940 MSH4O15457 936 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 GH2P01242 217 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 TCP1P17987 556 aaKnown RBP16.49■□□□□ 0.23
SCFD2-201ENST00000388940 JAG1P78504 1218 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
SCFD2-201ENST00000388940 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 MMGT1Q8N4V1 131 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 LSM14BQ9BX40 385 aaKnown RBP16.49■□□□□ 0.23
SCFD2-201ENST00000388940 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 VAV3Q9UKW4 847 aa16.49■□□□□ 0.23
SCFD2-201ENST00000388940 ZNF185O15231 689 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 TLR2O60603 784 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 MOCS3O95396 460 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 SNAP25P60880 206 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 PSMC6P62333 389 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 BMT2Q1RMZ1 405 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 USH1GQ495M9 461 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 CAGE1Q8TC20 777 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 RUBCNQ92622 972 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 UIMC1Q96RL1 719 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 PDE11AQ9HCR9 933 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 PSD3Q9NYI0 1048 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 AIPL1Q9NZN9 384 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 HERC5Q9UII4 1024 aaKnown RBP16.48■□□□□ 0.23
SCFD2-201ENST00000388940 EP400Q96L91 3159 aa16.48■□□□□ 0.23
SCFD2-201ENST00000388940 PDXKO00764 312 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 ERCC3P19447 782 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 KNOP1Q1ED39 458 aaKnown RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 SUGCTQ9HAC7 445 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 NLRC4Q9NPP4 1024 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 LUC7LQ9NQ29 371 aaKnown RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 PRR12Q9ULL5 1215 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 A0A1W2PRG0 241 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 POLR2FP61218 127 aaKnown RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 GFPT1Q06210 699 aaPredicted RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 AOC3Q16853 763 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 EXOC4Q96A65 974 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 PRMT6Q96LA8 375 aaPredicted RBP16.47■□□□□ 0.23
SCFD2-201ENST00000388940 REEP2Q9BRK0 252 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 GANQ9H2C0 597 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 HYOU1Q9Y4L1 999 aa16.47■□□□□ 0.23
SCFD2-201ENST00000388940 CCDC66A2RUB6 948 aa16.46■□□□□ 0.23
SCFD2-201ENST00000388940 CALUO43852 315 aaPredicted RBP16.46■□□□□ 0.23
SCFD2-201ENST00000388940 EYA4O95677 639 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms