RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 FAM26DQ5JW98 314 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 PCNX4Q63HM2 1172 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 CTCFLQ8NI51 663 aaPredicted RBP18.43■□□□□ 0.54
VCX3A-201ENST00000381089 LMBR1Q8WVP7 490 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 RRP36Q96EU6 259 aaKnown RBP18.43■□□□□ 0.54
VCX3A-201ENST00000381089 CDHR1Q96JP9 859 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 C11orf84Q9BUA3 381 aaPredicted RBP18.43■□□□□ 0.54
VCX3A-201ENST00000381089 PRKAG3Q9UGI9 489 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 KAT6AQ92794 2004 aa18.43■□□□□ 0.54
VCX3A-201ENST00000381089 RALGAPA2Q2PPJ7 1873 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 NLRC5Q86WI3 1866 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 RB1P06400 928 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
VCX3A-201ENST00000381089 CYP21A2P08686 494 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 SLC35G1Q2M3R5 365 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 TRIM50Q86XT4 487 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 UIMC1Q96RL1 719 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 LMAN2LQ9H0V9 348 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 BCAS3Q9H6U6 928 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 CLDND1Q9NY35 253 aa18.42■□□□□ 0.54
VCX3A-201ENST00000381089 RPLP2P05387 115 aaKnown RBP18.41■□□□□ 0.54
VCX3A-201ENST00000381089 SEMA3FQ13275 785 aa18.41■□□□□ 0.54
VCX3A-201ENST00000381089 RPAINQ86UA6 219 aa18.41■□□□□ 0.54
VCX3A-201ENST00000381089 MAP3K14Q99558 947 aa18.41■□□□□ 0.54
VCX3A-201ENST00000381089 SPZ1Q9BXG8 430 aa18.41■□□□□ 0.54
VCX3A-201ENST00000381089 IL25Q9H293 177 aa18.41■□□□□ 0.54
VCX3A-201ENST00000381089 E7EWF7 191 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 C5orf67F2Z3F1 127 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 PIK3CDO00329 1044 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 DCXO43602 365 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 GHRP10912 638 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 ADAM17P78536 824 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 PPFIA1Q13136 1202 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 TTC22Q5TAA0 569 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 GPRASP2Q96D09 838 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 UPF3BQ9BZI7 483 aaKnown RBP18.4■□□□□ 0.54
VCX3A-201ENST00000381089 ERAP1Q9NZ08 941 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
VCX3A-201ENST00000381089 ADGRA3Q8IWK6 1321 aa18.4■□□□□ 0.54
VCX3A-201ENST00000381089 DOCK5Q9H7D0 1870 aa18.39■□□□□ 0.54
VCX3A-201ENST00000381089 DDAH1O94760 285 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 SMARCA1P28370 1054 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 TCF7P36402 384 aaPredicted RBP18.39■□□□□ 0.53
VCX3A-201ENST00000381089 BMPR1AP36894 532 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 GNAQP50148 359 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 COL19A1Q14993 1142 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 USP17L6PQ6QN14 398 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 GLG1Q92896 1179 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 POP1Q99575 1024 aaKnown RBP18.39■□□□□ 0.53
VCX3A-201ENST00000381089 OSBPL7Q9BZF2 842 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 SENP2Q9HC62 589 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 TUBE1Q9UJT0 475 aa18.39■□□□□ 0.53
VCX3A-201ENST00000381089 MUC6Q6W4X9 2439 aa18.38■□□□□ 0.53
VCX3A-201ENST00000381089 CHRNA1P02708 482 aa18.38■□□□□ 0.53
VCX3A-201ENST00000381089 BTG3Q14201 252 aaPredicted RBP18.38■□□□□ 0.53
VCX3A-201ENST00000381089 CASC1Q6TDU7 716 aa18.38■□□□□ 0.53
VCX3A-201ENST00000381089 ADHFE1Q8IWW8 467 aa18.38■□□□□ 0.53
VCX3A-201ENST00000381089 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
VCX3A-201ENST00000381089 PPP2R3CQ969Q6 453 aa18.38■□□□□ 0.53
VCX3A-201ENST00000381089 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
VCX3A-201ENST00000381089 MEIS2O14770 477 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 PTH1RQ03431 593 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 ZP2Q05996 745 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 GRIK4Q16099 956 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 RUFY4Q6ZNE9 571 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 IGDCC4Q8TDY8 1250 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 PLVAPQ9BX97 442 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 SMARCAD1Q9H4L7 1026 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 PSTPIP2Q9H939 334 aa18.37■□□□□ 0.53
VCX3A-201ENST00000381089 RBAK-RBAKDNI3L0D1 243 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 M0QZ92 97 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 ENPP3O14638 875 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 MAFGO15525 162 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
VCX3A-201ENST00000381089 CHMLP26374 656 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 MARK3P27448 753 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 MTMR1Q13613 665 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 LPIN1Q14693 890 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 IER5Q5VY09 327 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 NFXL1Q6ZNB6 911 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 TSHZ1Q6ZSZ6 1077 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 TMTC2Q8N394 836 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 CLP1Q92989 425 aaKnown RBP18.36■□□□□ 0.53
VCX3A-201ENST00000381089 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 FTHL17Q9BXU8 183 aa18.36■□□□□ 0.53
VCX3A-201ENST00000381089 PIEZO1Q92508 2521 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 CCDC69A6NI79 296 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 RRN3P2A6NIE6 340 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 SPDYE3A6NKU9 549 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 KCNA2P16389 499 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 MGAT3Q09327 533 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 FBXO47Q5MNV8 452 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 MB21D2Q8IYB1 491 aaPredicted RBP18.35■□□□□ 0.53
VCX3A-201ENST00000381089 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
VCX3A-201ENST00000381089 KCNH6Q9H252 994 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms