RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 SRGNP10124 158 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 ATF2P15336 505 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 UBXN2AP68543 259 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 RAD54LQ92698 747 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 VTI1AQ96AJ9 217 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 PARVGQ9HBI0 331 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 ALAS1P13196 640 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 RASSF2P50749 326 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 KCNH2Q12809 1159 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 OTUD6AQ7L8S5 288 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 P3H4Q92791 437 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 NACC1Q96RE7 527 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 TMEM260Q9NX78 707 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 SHPRHQ149N8 1683 aa13.83□□□□□ -0.2
DNMT3A-204ENST00000380756 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 TESPA1A2RU30 521 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 FGGP02679 453 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 COASYQ13057 564 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 TSNAXIP1Q2TAA8 658 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 VPS52Q8N1B4 723 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 ZNF653Q96CK0 615 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 WDR11Q9BZH6 1224 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 CNOT10Q9H9A5 744 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 E9PMD0 336 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 ZBED4O75132 1171 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 SLCO1A2P46721 670 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 EIF3BP55884 814 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 ORC2Q13416 577 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 AOC3Q16853 763 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 CCDC62Q6P9F0 684 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 CCDC89Q8N998 374 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 NSUN4Q96CB9 384 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 NT5C1BQ96P26 610 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 MYCBPQ99417 103 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 MAP3K14Q99558 947 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 EDEM3Q9BZQ6 932 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 ZNF185O15231 689 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 HIP1RO75146 1068 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 RHOBTB3O94955 611 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 HPS3Q969F9 1004 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 VIPAS39Q9H9C1 493 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 NSFP46459 744 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 DR1Q01658 176 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 STK4Q13043 487 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 CDC37Q16543 378 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 CAPN12Q6ZSI9 719 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 MICAL1Q8TDZ2 1067 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 MXD3Q9BW11 206 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 FHOD1Q9Y613 1164 aa13.82□□□□□ -0.2
DNMT3A-204ENST00000380756 TDP2O95551 362 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 SERPINB2P05120 415 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 BMP3P12645 472 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 MFAP3P55082 362 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 ZNF577Q9BSK1 485 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 ZNF148Q9UQR1 794 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 C1orf167Q5SNV9 1468 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 SUGCTQ9HAC7 445 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 CIB2O75838 187 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 TROVE2P10155 538 aaKnown RBP eCLIP13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 PTK2Q05397 1052 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 ZNF34Q8IZ26 560 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 POMGNT1Q8WZA1 660 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 PCIF1Q9H4Z3 704 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L15C9J2P7 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L13C9JLJ4 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L11C9JVI0 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L18D6R9N7 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L22D6RA61 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L17D6RBQ6 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L19D6RCP7 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L20D6RJB6 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 PPIP5K2O43314 1243 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 GDF11O95390 407 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L24Q0WX57 530 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 ZKSCAN8Q15776 578 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 USP17L6PQ6QN14 398 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 PPP1R21Q6ZMI0 780 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 MMS22LQ6ZRQ5 1243 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 SRLQ86TD4 932 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 BBOF1Q8ND07 529 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 HNRNPLLQ8WVV9 542 aaKnown RBP13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 POTEB3A0JP26 581 aa13.8□□□□□ -0.2
DNMT3A-204ENST00000380756 POTECB2RU33 542 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms