RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 NCOA5Q9HCD5 579 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 ABCF3Q9NUQ8 709 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 DDX43Q9NXZ2 648 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 TMOD3Q9NYL9 352 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 SPATA31A6Q5VVP1 1343 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 PTPDC1A2A3K4 754 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 PHF20L1A8MW92 1017 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 SPTLC2O15270 562 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 PPP6R2O75170 966 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 LGR5O75473 907 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 STK10O94804 968 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 VDRP11473 427 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 MEA1Q16626 185 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 SLC9C2Q5TAH2 1124 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 TMEM53Q6P2H8 277 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 WDR59Q6PJI9 974 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 MAEAQ7L5Y9 396 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 PTF1AQ7RTS3 328 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 DEPTORQ8TB45 409 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 SEC62Q99442 399 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 USP44Q9H0E7 712 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 NAPBQ9H115 298 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 CARD9Q9H257 536 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 ZHX3Q9H4I2 956 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 TBCCD1Q9NVR7 557 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 CYP39A1Q9NYL5 469 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 PHRF1Q9P1Y6 1649 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 MYPNQ86TC9 1320 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 STRNO43815 780 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 CEP104O60308 925 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 RANBP6O60518 1105 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 APBA3O96018 575 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 ITGA2BP08514 1039 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 POLE2P56282 527 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 INF2Q27J81 1249 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 IFNL2Q8IZJ0 200 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 KRI1Q8N9T8 703 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 ZNF653Q96CK0 615 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 XPO6Q96QU8 1125 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 MAP3K14Q99558 947 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 LUC7LQ9NQ29 371 aaKnown RBP7.17□□□□□ -1.26
RIPK1-202ENST00000380409 DLGAP2Q9P1A6 1054 aa7.17□□□□□ -1.26
RIPK1-202ENST00000380409 ANKRD36CQ5JPF3 1778 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 KLF18A0A0U1RQI7 1052 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 KANSL1LA0AUZ9 987 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 GOLGA8AA7E2F4 631 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 SOCS7O14512 581 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 TIMM44O43615 452 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 GLI1P08151 1106 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 ERCC5P28715 1186 aaPredicted RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 IKQ13123 557 aaPredicted RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 SYDE2Q5VT97 1194 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 CLEC4GQ6UXB4 293 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 SMIM5Q71RC9 77 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 CACNA2D4Q7Z3S7 1137 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 KRT27Q7Z3Y8 459 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PNMA8AQ86V59 439 aaPredicted RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 ARHGAP18Q8N392 663 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 TRIML1Q8N9V2 468 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 LENG1Q96BZ8 264 aaPredicted RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 CLIP3Q96DZ5 547 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 DBNDD2Q9BQY9 259 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 DPH5Q9H2P9 285 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PAIP2BQ9ULR5 123 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 NWD1Q149M9 1564 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PRAMEF22A3QJZ6 481 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 HNRNPRO43390 633 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 UBOX5O94941 541 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 SNRPA1P09661 255 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 XBP1P17861 261 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 RASA1P20936 1047 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 CCT8P50990 548 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PLCD1P51178 756 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 SLC39A14Q15043 492 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 DIXDC1Q155Q3 683 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 DDB1Q16531 1140 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PARP6Q2NL67 630 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 C3orf67Q6ZVT6 689 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 RUFY1Q96T51 708 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 RAB17Q9H0T7 212 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 SEC31BQ9NQW1 1179 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 JAG2Q9Y219 1238 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 LRCH1Q9Y2L9 728 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PCDHA5Q9Y5H7 936 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 EIF4E1BA6NMX2 242 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 DCDC2CA8MYV0 355 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 KIF28PB7ZC32 967 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 TJP3O95049 919 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 GJB6O95452 261 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PORP16435 677 aaPredicted RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 CARSP49589 748 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 PSMD7P51665 324 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 MECOMQ03112 1051 aa7.16□□□□□ -1.26
RIPK1-202ENST00000380409 MKRN3Q13064 507 aaKnown RBP7.16□□□□□ -1.26
RIPK1-202ENST00000380409 TTLL12Q14166 644 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms