RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 MCF2LO15068 1137 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 KRT1P04264 644 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 PLA2G4BP0C869 781 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 NDUFA8P51970 172 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 DYNLT1P63172 113 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 LMNB2Q03252 620 aa11.83□□□□□ -0.51
LINC00654-201ENST00000379053 BUB1BO60566 1050 aaPredicted RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 OSBP2Q969R2 916 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 UBE2TQ9NPD8 197 aaPredicted RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 COPB1P53618 953 aaKnown RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 PEX3P56589 373 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 RWDD4Q6NW29 188 aaKnown RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 GDAP1L1Q96MZ0 367 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 PPFIA4O75335 1185 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 SEPT2Q15019 361 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 UHMK1Q8TAS1 419 aaKnown RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 P2RX5Q93086 422 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 RRAGDQ9NQL2 400 aaPredicted RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 BRD1O95696 1058 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 YAF2Q8IY57 180 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 KCTD6Q8NC69 237 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 TSC1Q92574 1164 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 DHTKD1Q96HY7 919 aaPredicted RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 MRPL47Q9HD33 250 aaKnown RBP11.83□□□□□ -0.52
LINC00654-201ENST00000379053 MINPP1Q9UNW1 487 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 MTMR6Q9Y217 621 aa11.83□□□□□ -0.52
LINC00654-201ENST00000379053 INHBAP08476 426 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 CASP2P42575 452 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 MAPK6Q16659 721 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 ZNF667Q5HYK9 610 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 CCDC170Q8IYT3 715 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 RSRC1Q96IZ7 334 aaKnown RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 CABS1Q96KC9 395 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 MTRQ99707 1265 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 ZSWIM5Q9P217 1185 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 A6NNZ2 444 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 KCNQ2O43526 872 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 CPP00450 1065 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 PRDX5P30044 214 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 ALCAMQ13740 583 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 PTPN22Q9Y2R2 807 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 KDM5CP41229 1560 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 A0A1B0GUA9 196 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 SH2B2O14492 632 aaPredicted RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 TXNDC9O14530 226 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 CYP27B1O15528 508 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 PRPF3O43395 683 aaKnown RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 HUNKP57058 714 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 RASSF7Q02833 373 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 TNFAIP2Q03169 654 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 AP3B2Q13367 1082 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 VPS72Q15906 364 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 KSR1Q8IVT5 923 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 ARHGAP42A6NI28 874 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 HUS1O60921 280 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 VEGFAP15692 232 aaPredicted RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 NNMTP40261 264 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 EHHADHQ08426 723 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 BHMT2Q9H2M3 363 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 HOMER3Q9NSC5 361 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 GCNT4Q9P109 453 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 OVOS2A0A0G2JMS6 1433 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 OVOS2A0A0J9YW53 1432 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 OVOS2Q6IE36 1432 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 PCK1P35558 622 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 COPB2P35606 906 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 SOX5P35711 763 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 ASPHQ12797 758 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 SLC39A14Q15043 492 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 DARS2Q6PI48 645 aaKnown RBP11.82□□□□□ -0.52
LINC00654-201ENST00000379053 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
LINC00654-201ENST00000379053 PRR36Q9H6K5 1346 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
LINC00654-201ENST00000379053 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
LINC00654-201ENST00000379053 CDC25AP30304 524 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 GBP1P32455 592 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 NR5A1Q13285 461 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 N4BP2L2Q92802 583 aaPredicted RBP11.81□□□□□ -0.52
LINC00654-201ENST00000379053 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00654-201ENST00000379053 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 CHRNA5P30532 468 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 SLC12A1Q13621 1099 aa11.81□□□□□ -0.52
LINC00654-201ENST00000379053 DGKHQ86XP1 1220 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms