RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 TERF2Q15554 542 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 SPECC1LQ69YQ0 1117 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 ANKRD40Q6AI12 368 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 SNRNP48Q6IEG0 339 aaKnown RBP21.58■■□□□ 1.05
SSU72-204ENST00000378726 REXO1L1PQ8IX06 675 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 HSD17B14Q9BPX1 270 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 ST7Q9NRC1 585 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 PANK4Q9NVE7 773 aa21.58■■□□□ 1.05
SSU72-204ENST00000378726 BICDL2A1A5D9 508 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 KCNJ18B7U540 433 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 IPO5O00410 1097 aaKnown RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 CHMP2AO43633 222 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 CYP11B2P19099 503 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 IREB2P48200 963 aaKnown RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 EHHADHQ08426 723 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 KCNJ12Q14500 433 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 TMEM132BQ14DG7 1078 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 PCNX4Q63HM2 1172 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 IRF2BP1Q8IU81 584 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 ANKRD20A12PQ8NF67 263 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 CNKSR2Q8WXI2 1034 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 ZNF214Q9UL59 606 aaPredicted RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 PHLPP2Q6ZVD8 1323 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 NPHP3-ACAD11A0A0J9YXS1 232 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 CCP110O43303 1012 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 SLITRK3O94933 977 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 EIF2AK2P19525 551 aaKnown RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 PABPC4Q13310 644 aaKnown RBP eCLIP21.57■■□□□ 1.043e-8■■■■□ 26.2
SSU72-204ENST00000378726 ARSHQ5FYA8 562 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 SYT2Q8N9I0 419 aaPredicted RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 ZC3H15Q8WU90 426 aaKnown RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 RMDN3Q96TC7 470 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 DUSP9Q99956 384 aaKnown RBP21.57■■□□□ 1.04
SSU72-204ENST00000378726 WDR11Q9BZH6 1224 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 KCNH7Q9NS40 1196 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 PHIPQ8WWQ0 1821 aa21.57■■□□□ 1.04
SSU72-204ENST00000378726 BCRP11274 1271 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 MRPS9P82933 396 aaKnown RBP21.56■■□□□ 1.04
SSU72-204ENST00000378726 BAATQ14032 418 aaPredicted RBP21.56■■□□□ 1.04
SSU72-204ENST00000378726 CSGALNACT2Q8N6G5 542 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 THAP9Q9H5L6 903 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 KRT18P05783 430 aaKnown RBP21.56■■□□□ 1.04
SSU72-204ENST00000378726 CLCN6P51797 869 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 RAD51AP2Q09MP3 1159 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 COASYQ13057 564 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 TBX2Q13207 712 aaPredicted RBP21.56■■□□□ 1.04
SSU72-204ENST00000378726 CTTNQ14247 550 aaKnown RBP21.56■■□□□ 1.04
SSU72-204ENST00000378726 ARHGAP29Q52LW3 1261 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 NIPA1Q7RTP0 329 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 TPH2Q8IWU9 490 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 CCDC65Q8IXS2 484 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
SSU72-204ENST00000378726 TEKT3Q9BXF9 490 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 VPS16Q9H269 839 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 UBIAD1Q9Y5Z9 338 aa21.56■■□□□ 1.04
SSU72-204ENST00000378726 N4BP3O15049 544 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 HOXA7P31268 230 aaPredicted RBP21.55■■□□□ 1.04
SSU72-204ENST00000378726 NF2P35240 595 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 PGM5Q15124 567 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 TKFCQ3LXA3 575 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 TAF3Q5VWG9 929 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 CENPPQ6IPU0 288 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 TMEM139Q8IV31 216 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 GUF1Q8N442 669 aaKnown RBP21.55■■□□□ 1.04
SSU72-204ENST00000378726 KCTD17Q8N5Z5 321 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 CDCA5Q96FF9 252 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 DYDC2Q96IM9 177 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 RIT2Q99578 217 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 UNC45AQ9H3U1 944 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 TUFT1Q9NNX1 390 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 GLTPD2A6NH11 291 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 SPDYE16A6NNV3 312 aaPredicted RBP21.55■■□□□ 1.04
SSU72-204ENST00000378726 ATP2A1O14983 1001 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 COPB1P53618 953 aaKnown RBP21.55■■□□□ 1.04
SSU72-204ENST00000378726 CACNB1Q02641 598 aaPredicted RBP21.55■■□□□ 1.04
SSU72-204ENST00000378726 LRRC41Q15345 812 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 ARHGEF16Q5VV41 709 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 NOC3LQ8WTT2 800 aaKnown RBP21.55■■□□□ 1.04
SSU72-204ENST00000378726 TEX13BQ9BXU2 312 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 ELP3Q9H9T3 547 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 JADE2Q9NQC1 790 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 TAB2Q9NYJ8 693 aa21.55■■□□□ 1.04
SSU72-204ENST00000378726 MYCLP12524 364 aaPredicted RBP21.54■■□□□ 1.04
SSU72-204ENST00000378726 PLS1Q14651 629 aa21.54■■□□□ 1.04
SSU72-204ENST00000378726 HERC4Q5GLZ8 1057 aaPredicted RBP21.54■■□□□ 1.04
SSU72-204ENST00000378726 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
SSU72-204ENST00000378726 BHMT2Q9H2M3 363 aa21.54■■□□□ 1.04
SSU72-204ENST00000378726 PXMP2Q9NR77 195 aa21.54■■□□□ 1.04
SSU72-204ENST00000378726 PKD2L1Q9P0L9 805 aa21.54■■□□□ 1.04
SSU72-204ENST00000378726 FRMPD4Q14CM0 1322 aa21.54■■□□□ 1.04
SSU72-204ENST00000378726 EEF1GP26641 437 aaKnown RBP21.53■■□□□ 1.04
SSU72-204ENST00000378726 TTLL12Q14166 644 aaPredicted RBP21.53■■□□□ 1.04
SSU72-204ENST00000378726 EPHA7Q15375 998 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 FAM26FQ5R3K3 315 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 TREML2Q5T2D2 321 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 B3GNT9Q6UX72 402 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 MOB2Q70IA6 237 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 GLIS3Q8NEA6 775 aa21.53■■□□□ 1.04
SSU72-204ENST00000378726 EEF2KMTQ96G04 330 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms