RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 MROH7-TTC4A0A0A0MT08 1334 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 USP27XA6NNY8 438 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 CCDC188H7C350 402 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 M0QZ92 97 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 FOXN1O15353 648 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 HOXA13P31271 388 aaPredicted RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 SGO2Q562F6 1265 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 KAZNQ674X7 775 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 GUF1Q8N442 669 aaKnown RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 FAM20AQ96MK3 541 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 TTC19Q6DKK2 380 aaPredicted RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 CAPN12Q6ZSI9 719 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 NCAPG2Q86XI2 1143 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 RILPQ96NA2 401 aa12.25□□□□□ -0.45
RPGR-203ENST00000378505 MRPL47Q9HD33 250 aaKnown RBP12.25□□□□□ -0.45
RPGR-203ENST00000378505 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 ECEL1O95672 775 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 GH2P01242 217 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
RPGR-203ENST00000378505 GLE1Q53GS7 698 aaKnown RBP12.24□□□□□ -0.45
RPGR-203ENST00000378505 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 CHGBP05060 677 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 KCNJ6P48051 423 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 TFDP1Q14186 410 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 CC2D1AQ6P1N0 951 aaPredicted RBP12.24□□□□□ -0.45
RPGR-203ENST00000378505 CCT6BQ92526 530 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 RAD54LQ92698 747 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 SPZ1Q9BXG8 430 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 RAD17O75943 681 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 SUN1O94901 812 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 ADRA2BP18089 450 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 RFX5P48382 616 aaPredicted RBP12.24□□□□□ -0.45
RPGR-203ENST00000378505 IFNAR2P48551 515 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 NNTQ13423 1086 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 CTTNQ14247 550 aaKnown RBP12.24□□□□□ -0.45
RPGR-203ENST00000378505 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
RPGR-203ENST00000378505 PCDHA6Q9UN73 950 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 PCDHA8Q9Y5H6 950 aa12.24□□□□□ -0.45
RPGR-203ENST00000378505 A0A1W2PQC6 194 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 GMNNO75496 209 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 KRT27Q7Z3Y8 459 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 TRIM50Q86XT4 487 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 RHOT2Q8IXI1 618 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 CAMSAP1Q5T5Y3 1602 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 GIPC1O14908 333 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 SLC7A5Q01650 507 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 CUL1Q13616 776 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 TERF2Q15554 542 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 TBC1D10BQ4KMP7 808 aaPredicted RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 PODNQ7Z5L7 613 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 CCDC197Q8NCU1 140 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 NSMCE1Q8WV22 266 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 MASTLQ96GX5 879 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 RIOK1Q9BRS2 568 aaKnown RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 ADD3Q9UEY8 706 aaKnown RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 STK38LQ9Y2H1 464 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 RRP15Q9Y3B9 282 aaKnown RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L15C9J2P7 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L13C9JLJ4 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L11C9JVI0 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L18D6R9N7 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L22D6RA61 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L17D6RBQ6 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L19D6RCP7 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L20D6RJB6 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 HIP1RO75146 1068 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 ASNSP08243 561 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L24Q0WX57 530 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 IFT88Q13099 833 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 KCNB1Q14721 858 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 SLMAPQ14BN4 828 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 GADL1Q6ZQY3 521 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 PDZD4Q76G19 769 aaPredicted RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 RNF10Q8N5U6 811 aaKnown RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 CRCPO75575 148 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 MMP10P09238 476 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 SLC12A2P55011 1212 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 ARHGAP4P98171 946 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 CCDC38Q502W7 563 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 MIS18BP1Q6P0N0 1132 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 NEK9Q8TD19 979 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 RAB3IPQ96QF0 476 aaPredicted RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 FMO2Q99518 471 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
RPGR-203ENST00000378505 VCX3BQ9H321 246 aa12.23□□□□□ -0.45
RPGR-203ENST00000378505 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 CRKP46108 304 aa12.22□□□□□ -0.45
RPGR-203ENST00000378505 EIF3BP55884 814 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms