RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 KRT3P12035 628 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ADD2P35612 726 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ECE1P42892 770 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 ACBD5Q5T8D3 534 aaPredicted RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 KCTD1Q719H9 257 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 PDZD8Q8NEN9 1154 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 AIFM3Q96NN9 605 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 LTKP29376 864 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 MAGEA9P43362 315 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 KCNJ6P48051 423 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 SNAP25P60880 206 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 CXorf38Q8TB03 319 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 KLHL29Q96CT2 875 aa12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 RNF26Q9BY78 433 aaPredicted RBP12.97□□□□□ -0.33
PCDHA9-201ENST00000378122 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 EVI5O60447 810 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 ECEL1O95672 775 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 GSTA1P08263 222 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 GSTA2P09210 222 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 CNOT10Q9H9A5 744 aaKnown RBP12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 INTUQ9ULD6 942 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 MAP3K7O43318 606 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 MX2P20592 715 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 ODR4Q5SWX8 454 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 PBKQ96KB5 322 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 TRIM56Q9BRZ2 755 aaKnown RBP12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 TYW5A2RUC4 315 aaKnown RBP12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 SRGAP2O75044 1071 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 SASH1O94885 1247 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 SERPING1P05155 500 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 MB21D1Q8N884 522 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 COPRSQ9NQ92 184 aa12.96□□□□□ -0.33
PCDHA9-201ENST00000378122 LRRIQ4A6NIV6 560 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 OSTNP61366 133 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 FASTKD5Q7L8L6 764 aaKnown RBP12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 ZBTB8OSQ8IWT0 167 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 LCORLQ8N3X6 602 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 GCNT4Q9P109 453 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 DYNLT1P63172 113 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 SYNE4Q8N205 404 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 ENOX1Q8TC92 643 aaKnown RBP12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 CFAP36Q96G28 342 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 SCOCQ9UIL1 159 aa12.96□□□□□ -0.34
PCDHA9-201ENST00000378122 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 GOLGA8CPA6NN73 597 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 MYO1CO00159 1063 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 JADE1Q6IE81 842 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 RAPH1Q70E73 1250 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 GSPT2Q8IYD1 628 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 TBCKQ8TEA7 893 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 TXLNGQ9NUQ3 528 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 SRPRBQ9Y5M8 271 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 SLFN14P0C7P3 912 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 CASP2P42575 452 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 PLCB4Q15147 1175 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ANO4Q32M45 955 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 CHRNA5P30532 468 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 KIF11P52732 1056 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ANKRD20A2Q5SQ80 823 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ANKRD20A1Q5TYW2 823 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 MRPL46Q9H2W6 279 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 DISC1Q9NRI5 854 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 THEGQ9P2T0 379 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 NFU1Q9UMS0 254 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 PLAAQ9Y263 795 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 MAP3K15Q6ZN16 1313 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ARHGEF5Q12774 1597 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 WDR91A4D1P6 747 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 IL1RL1Q01638 556 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 FAM186BQ8IYM0 893 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 WHAMMQ8TF30 809 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 ANLNQ9NQW6 1124 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 NPHP4O75161 1426 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 KBTBD13C9JR72 458 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 KRT1P04264 644 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 PLS3P13797 630 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 HDLBPQ00341 1268 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 TMED1Q13445 227 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 UBE2TQ9NPD8 197 aaPredicted RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 TNPO2O14787 897 aaKnown RBP12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 TRAPPC10P48553 1259 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 PTK2Q05397 1052 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 RESP18Q5W5W9 173 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 SLFN13Q68D06 897 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 PIGSQ96S52 555 aa12.95□□□□□ -0.34
PCDHA9-201ENST00000378122 MFAP3LO75121 409 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 PDE8BO95263 885 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 CYP27A1Q02318 531 aa12.94□□□□□ -0.34
PCDHA9-201ENST00000378122 KRT31Q15323 416 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms