RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 OSBPL10Q9BXB5 764 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 COA1Q9GZY4 146 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 RNF17Q9BXT8 1623 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 AFPP02771 609 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 PABPC4Q13310 644 aaKnown RBP eCLIP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ACCSQ96QU6 501 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CFAP69A5D8W1 941 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 MYO1EQ12965 1108 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 HOXC10Q9NYD6 342 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 KDM5CP41229 1560 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 KRT7P08729 469 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ATP2B1P20020 1258 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ADSLP30566 484 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 NOA1Q8NC60 698 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 SLC26A2P50443 739 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ZNF394Q53GI3 561 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CENPPQ6IPU0 288 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 HDAC7Q8WUI4 952 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 PABPC3Q9H361 631 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 VWA3AA6NCI4 1184 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCNT1O60563 726 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCR3P51677 355 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 HSPA2P54652 639 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 TTLL11Q8NHH1 800 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 HNRNPH2P55795 449 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 FKBP1AP62942 108 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 MEA1Q16626 185 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCT7Q99832 543 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 MAGEB5Q9BZ81 275 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ZMYND12Q9H0C1 365 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 EMILIN3Q9NT22 766 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 PCDHB2Q9Y5E7 798 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 NCAM2O15394 837 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 KRT5P13647 590 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC144BQ3MJ40 725 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 SLC27A3Q5K4L6 730 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 SLC9A9Q8IVB4 645 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CROCCP3Q8IVE0 287 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ATP6V1G3Q96LB4 118 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 HHATQ5VTY9 493 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCZ1BP86790 482 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCZ1P86791 482 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 FAM227BQ96M60 508 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 FUCA2Q9BTY2 467 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 DNAJB1P25685 340 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CHMP6Q96FZ7 201 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 GDPD2Q9HCC8 539 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ATP7AQ04656 1500 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 SPECC1L-ADORA2AF8WAN1 911 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 H3BQF6 201 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CDK7P50613 346 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 NFIL3Q16649 462 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 MAGEB6Q8N7X4 407 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 STN1Q9H668 368 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 NIP7Q9Y221 180 aaKnown RBP eCLIP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 SMARCAL1Q9NZC9 954 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ARL2BPQ9Y2Y0 163 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 PTCD1O75127 700 aaKnown RBP5.34□□□□□ -1.55
PCDH9-201ENST00000377861 GFAPP14136 432 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 FECHP22830 423 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 MTBPQ96DY7 904 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ZBED4O75132 1171 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 SCNN1DP51172 638 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 RWDD2BP57060 319 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ASIC2Q16515 512 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 DNAL1Q4LDG9 190 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 KIFC3Q9BVG8 833 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CCDC126Q96EE4 140 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 ISCUQ9H1K1 167 aa5.34□□□□□ -1.55
PCDH9-201ENST00000377861 CENPCQ03188 943 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 ZSCAN29Q8IWY8 852 aaPredicted RBP5.34□□□□□ -1.56
PCDH9-201ENST00000377861 CCDC105Q8IYK2 499 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 SALL3Q9BXA9 1300 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 RSRC2Q7L4I2 434 aaKnown RBP5.34□□□□□ -1.56
PCDH9-201ENST00000377861 RRAGAQ7L523 313 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 TRAIPQ9BWF2 469 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 SMIM24O75264 130 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 KRT38O76015 456 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 RBL2Q08999 1139 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 NIPA1Q7RTP0 329 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 GTF3C2Q8WUA4 911 aaPredicted RBP5.34□□□□□ -1.56
PCDH9-201ENST00000377861 RRP15Q9Y3B9 282 aaKnown RBP5.34□□□□□ -1.56
PCDH9-201ENST00000377861 NEDD1Q8NHV4 660 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 MTO1Q9Y2Z2 717 aaKnown RBP5.34□□□□□ -1.56
PCDH9-201ENST00000377861 MYO1CO00159 1063 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 SKOR1P84550 965 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 TKFCQ3LXA3 575 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 FMO2Q99518 471 aa5.34□□□□□ -1.56
PCDH9-201ENST00000377861 NR1D1P20393 614 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 MB21D2Q8IYB1 491 aaPredicted RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 CHCHD4Q8N4Q1 142 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 IPO11Q9UI26 975 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 KLHL41O60662 606 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 FAM163BP0C2L3 166 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 DDB1Q16531 1140 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 FAM204AQ9H8W3 233 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 AFMP43652 599 aa5.33□□□□□ -1.56
PCDH9-201ENST00000377861 RPL26P61254 145 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 WDR75Q8IWA0 830 aaKnown RBP5.33□□□□□ -1.56
PCDH9-201ENST00000377861 OLFML3Q9NRN5 406 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms