RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 AFAP1L1Q8TED9 768 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 SEPT1Q8WYJ6 367 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 HERVK_113Q902F9 699 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 CXXC1Q9P0U4 656 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
SMARCE1-203ENST00000377808 SEC24BO95487 1268 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 GNAT1P11488 350 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 CKBP12277 381 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 DNAJB2P25686 324 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 THPOP40225 353 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 HIC1Q14526 733 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 MCTP2Q6DN12 878 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 CTAGE1Q96RT6 745 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 AZI2Q9H6S1 392 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 AGO4Q9HCK5 861 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 SETD4Q9NVD3 440 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 SLC4A7Q9Y6M7 1214 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 SCN5AQ14524 2016 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 TANC1Q9C0D5 1861 aa13.17□□□□□ -0.3
SMARCE1-203ENST00000377808 GSTTP1A0A1W2PQM5 241 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 TREHO43280 583 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 DTNBO60941 627 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 NEK4P51957 841 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 ZNF618Q5T7W0 954 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 WNT8BQ93098 351 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 TIFAQ96CG3 184 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 ZNF577Q9BSK1 485 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 SMARCAD1Q9H4L7 1026 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 MTMR10Q9NXD2 777 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 ERAP1Q9NZ08 941 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 NFASCO94856 1347 aa13.16□□□□□ -0.3
SMARCE1-203ENST00000377808 FAM86B1E9PN63 330 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 MEIS1O00470 390 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 BACH1O14867 736 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 PFKFB2O60825 505 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 CTSHP09668 335 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 FAM86B2P0C5J1 330 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 PBX2P40425 430 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 ACTR2P61160 394 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 IGBP1P78318 339 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 PRR16Q569H4 304 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 LMBR1Q8WVP7 490 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 PBX4Q9BYU1 374 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 TRPC6Q9Y210 931 aa13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 TRIP12Q14669 1992 aaPredicted RBP13.15□□□□□ -0.3
SMARCE1-203ENST00000377808 CYP3A4P08684 503 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 XBP1P17861 261 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 KCNJ6P48051 423 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 RABGGTBP53611 331 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 RAB30Q15771 203 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 RASIP1Q5U651 963 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 NIPA1Q7RTP0 329 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 SERINC5Q86VE9 423 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 SEMA6BQ9H3T3 888 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 LAMA2P24043 3122 aaKnown RBP13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 EMSYQ7Z589 1322 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 NRCAMQ92823 1304 aa13.14□□□□□ -0.31
SMARCE1-203ENST00000377808 RSPH10B2B2RC85 870 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 RBAK-RBAKDNI3L0D1 243 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 IPO5O00410 1097 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 NBNO60934 754 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 LARGE1O95461 756 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 RSPH10BP0C881 870 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 STAT5BP51692 787 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 FOSBP53539 338 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 GRIK4Q16099 956 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 MIS18BP1Q6P0N0 1132 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 VWCEQ96DN2 955 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 NKX2-4Q9H2Z4 354 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 SAMM50Q9Y512 469 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 STK36Q9NRP7 1315 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 IGLV3-22A0A075B6J6 115 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 RBL2Q08999 1139 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 ME3Q16798 604 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 FAM160B1Q5W0V3 765 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 CNKSR3Q6P9H4 555 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 TRMT1LQ7Z2T5 733 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 CRYGNQ8WXF5 182 aa13.13□□□□□ -0.31
SMARCE1-203ENST00000377808 MYLIPQ8WY64 445 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms