RNA–Protein interactions for RNA: ENST00000377792.3

POLR1E-201, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2 BASIC

Gene POLR1E, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-201ENST00000377792 PRLRP16471 622 aa12.11□□□□□ -0.47
POLR1E-201ENST00000377792 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
POLR1E-201ENST00000377792 ABCB5Q2M3G0 1257 aa12.11□□□□□ -0.47
POLR1E-201ENST00000377792 FAM83BQ5T0W9 1011 aa12.11□□□□□ -0.47
POLR1E-201ENST00000377792 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
POLR1E-201ENST00000377792 FBXO11Q86XK2 927 aa12.11□□□□□ -0.47
POLR1E-201ENST00000377792 CREG2Q8IUH2 290 aa12.11□□□□□ -0.47
POLR1E-201ENST00000377792 SYN2Q92777 582 aaPredicted RBP12.11□□□□□ -0.47
POLR1E-201ENST00000377792 LENG9Q96B70 501 aa12.11□□□□□ -0.47
POLR1E-201ENST00000377792 LSM14BQ9BX40 385 aaKnown RBP12.11□□□□□ -0.47
POLR1E-201ENST00000377792 NUCKS1Q9H1E3 243 aaKnown RBP12.11□□□□□ -0.47
POLR1E-201ENST00000377792 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.11□□□□□ -0.47
POLR1E-201ENST00000377792 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 TLR2O60603 784 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 N4BP1O75113 896 aaKnown RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 FOSP01100 380 aaPredicted RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SPATA31C1P0DKV0 1188 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SREBF1P36956 1147 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 MMP14P50281 582 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 PSMC6P62333 389 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ADAM9Q13443 819 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 EDRF1Q3B7T1 1238 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 USH1GQ495M9 461 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SYDE2Q5VT97 1194 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SFMBT2Q5VUG0 894 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 IQCEQ6IPM2 695 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ERMNQ8TAM6 284 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ALS2CR12Q96Q35 445 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ZHX3Q9H4I2 956 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SALL4Q9UJQ4 1053 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ADAM21Q9UKJ8 722 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 COL11A2P13942 1736 aaPredicted RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ARFGEF1Q9Y6D6 1849 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 FAM86B1E9PN63 330 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 MEIS1O00470 390 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SERPING1P05155 500 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 FAM86B2P0C5J1 330 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 RPA1P27694 616 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 POLR2FP61218 127 aaKnown RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 JAG1P78504 1218 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 RASSF7Q02833 373 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 IKQ13123 557 aaPredicted RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 GIT2Q14161 759 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SLC9C1Q4G0N8 1177 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 ZNF572Q7Z3I7 529 aaPredicted RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SYT2Q8N9I0 419 aaPredicted RBP12.1□□□□□ -0.47
POLR1E-201ENST00000377792 COG1Q8WTW3 980 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 EXOC4Q96A65 974 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 FAM184BQ9ULE4 1060 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
POLR1E-201ENST00000377792 SPDYE3A6NKU9 549 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 CETN3O15182 167 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 BMP3P12645 472 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 TAL1P17542 331 aaPredicted RBP12.09□□□□□ -0.47
POLR1E-201ENST00000377792 CASP5P51878 434 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 APBA1Q02410 837 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.475e-7■■■■■ 28.9
POLR1E-201ENST00000377792 TXLNBQ8N3L3 684 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 MMGT1Q8N4V1 131 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 ANKRD13CQ8N6S4 541 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 ZBTB9Q96C00 473 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 FAM20AQ96MK3 541 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 OSBPL9Q96SU4 736 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 VPS18Q9P253 973 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 HYOU1Q9Y4L1 999 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 OPLAHO14841 1288 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 ZMYND10O75800 440 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 GH2P01242 217 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 TCP1P17987 556 aaKnown RBP12.09□□□□□ -0.47
POLR1E-201ENST00000377792 CIITAP33076 1130 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 ITIH3Q06033 890 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 CCNI2Q6ZMN8 369 aaPredicted RBP12.09□□□□□ -0.47
POLR1E-201ENST00000377792 RNF10Q8N5U6 811 aaKnown RBP12.09□□□□□ -0.47
POLR1E-201ENST00000377792 REEP2Q9BRK0 252 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 ACBD3Q9H3P7 528 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 TDRD3Q9H7E2 651 aaKnown RBP12.09□□□□□ -0.47
POLR1E-201ENST00000377792 PSD3Q9NYI0 1048 aa12.09□□□□□ -0.47
POLR1E-201ENST00000377792 MSH4O15457 936 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 NR2F2P24468 414 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 KCNH2Q12809 1159 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
POLR1E-201ENST00000377792 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
POLR1E-201ENST00000377792 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 EPM2AIP1Q7L775 607 aaPredicted RBP12.08□□□□□ -0.48
POLR1E-201ENST00000377792 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 FAM71BQ8TC56 605 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
POLR1E-201ENST00000377792 NOX5Q96PH1 765 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms