RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ATP1A2P50993 1020 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 KLHL30Q0D2K2 578 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 NNTQ13423 1086 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 SEPT2Q15019 361 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 CUL5Q93034 780 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 GOLPH3Q9H4A6 298 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 DDX4Q9NQI0 724 aaKnown RBP14.55□□□□□ -0.08
ACTN1-202ENST00000376839 RNF14Q9UBS8 474 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 GGA1Q9UJY5 639 aa14.55□□□□□ -0.08
ACTN1-202ENST00000376839 ACTN1P12814 892 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 CYP11B2P19099 503 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 STAT3P40763 770 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 HYIQ5T013 277 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 KCTD1Q719H9 257 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 CCDC65Q8IXS2 484 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 EFCAB13Q8IY85 973 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 IQCKQ8N0W5 287 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 PPM1EQ8WY54 764 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 PIK3R5Q8WYR1 880 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 RPGRQ92834 1020 aaKnown RBP14.54□□□□□ -0.08
ACTN1-202ENST00000376839 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-202ENST00000376839 HOXA7P31268 230 aaPredicted RBP14.54□□□□□ -0.08
ACTN1-202ENST00000376839 CASP5P51878 434 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 MARSP56192 900 aaKnown RBP14.54□□□□□ -0.08
ACTN1-202ENST00000376839 SKOR1P84550 965 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 PAK2Q13177 524 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 ASIC2Q16515 512 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 PRR5LQ6MZQ0 368 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 PPP1R18Q6NYC8 613 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 ZHX3Q9H4I2 956 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 EMILIN3Q9NT22 766 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 POLLQ9UGP5 575 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 SAMM50Q9Y512 469 aa14.54□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L15C9J2P7 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L13C9JLJ4 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L11C9JVI0 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L18D6R9N7 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L22D6RA61 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L17D6RBQ6 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L19D6RCP7 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L20D6RJB6 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 ATP2B4P23634 1241 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L24Q0WX57 530 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 KCNH2Q12809 1159 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 ADAM9Q13443 819 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 PTPROQ16827 1216 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 USP17L6PQ6QN14 398 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 PSTPIP2Q9H939 334 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 LUC7LQ9NQ29 371 aaKnown RBP14.53□□□□□ -0.08
ACTN1-202ENST00000376839 AIPL1Q9NZN9 384 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 FAM169AQ9Y6X4 670 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 ARFGEF1Q9Y6D6 1849 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 BTAF1O14981 1849 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 F8W031 263 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-202ENST00000376839 EBAG9O00559 213 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 RAD51CO43502 376 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 MED24O75448 989 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 GNA14O95837 355 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 TTLL1O95922 423 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 KCTD19Q17RG1 926 aaPredicted RBP14.53□□□□□ -0.08
ACTN1-202ENST00000376839 ARSHQ5FYA8 562 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 CFAP58Q5T655 872 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 KDM3AQ9Y4C1 1321 aa14.53□□□□□ -0.08
ACTN1-202ENST00000376839 POTEFA5A3E0 1075 aa14.52□□□□□ -0.08
ACTN1-202ENST00000376839 POTEIP0CG38 1075 aa14.52□□□□□ -0.08
ACTN1-202ENST00000376839 EPS15P42566 896 aa14.52□□□□□ -0.08
ACTN1-202ENST00000376839 MRPL12P52815 198 aaKnown RBP14.52□□□□□ -0.08
ACTN1-202ENST00000376839 POTEGQ6S5H5 508 aa14.52□□□□□ -0.08
ACTN1-202ENST00000376839 POTEEQ6S8J3 1075 aa14.52□□□□□ -0.08
ACTN1-202ENST00000376839 KLHL7Q8IXQ5 586 aa14.52□□□□□ -0.08
ACTN1-202ENST00000376839 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.08
ACTN1-202ENST00000376839 SLC9A1P19634 815 aa14.52□□□□□ -0.09
ACTN1-202ENST00000376839 GTF2IP78347 998 aa14.52□□□□□ -0.09
ACTN1-202ENST00000376839 PTK2Q05397 1052 aa14.52□□□□□ -0.09
ACTN1-202ENST00000376839 DPY19L2P1Q6NXN4 242 aa14.52□□□□□ -0.09
ACTN1-202ENST00000376839 ZNF571Q7Z3V5 609 aaPredicted RBP14.52□□□□□ -0.09
ACTN1-202ENST00000376839 SLF2Q8IX21 1173 aa14.52□□□□□ -0.09
ACTN1-202ENST00000376839 ZC3H3Q8IXZ2 948 aaKnown RBP14.52□□□□□ -0.09
ACTN1-202ENST00000376839 A0A087WUV0 522 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-202ENST00000376839 SHTN1A0MZ66 631 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 ZBTB5O15062 677 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 GCFC2P16383 781 aaKnown RBP14.51□□□□□ -0.09
ACTN1-202ENST00000376839 NR2F2P24468 414 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 LIG3P49916 1009 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 CDC37Q16543 378 aaPredicted RBP14.51□□□□□ -0.09
ACTN1-202ENST00000376839 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 MICALL1Q8N3F8 863 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 USP38Q8NB14 1042 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 TBC1D16Q8TBP0 767 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
ACTN1-202ENST00000376839 FOCADQ5VW36 1801 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 KCNK3O14649 394 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 KRT18P05783 430 aaKnown RBP14.51□□□□□ -0.09
ACTN1-202ENST00000376839 SLC12A3P55017 1021 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 IRF2BP2Q7Z5L9 587 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 MREGQ8N565 214 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 EFCC1Q9HA90 598 aa14.51□□□□□ -0.09
ACTN1-202ENST00000376839 HDAC9Q9UKV0 1011 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms