RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MRPL11Q9Y3B7 192 aaKnown RBP22.38■■□□□ 1.17
VSX1-202ENST00000376709 IGLV3-22A0A075B6J6 115 aa22.37■■□□□ 1.17
VSX1-202ENST00000376709 CDK17Q00537 523 aa22.37■■□□□ 1.17
VSX1-202ENST00000376709 GIT2Q14161 759 aa22.37■■□□□ 1.17
VSX1-202ENST00000376709 RASA3Q14644 834 aa22.37■■□□□ 1.17
VSX1-202ENST00000376709 EIF2AK1Q9BQI3 630 aaKnown RBP22.37■■□□□ 1.17
VSX1-202ENST00000376709 REEP2Q9BRK0 252 aa22.37■■□□□ 1.17
VSX1-202ENST00000376709 EPHB6O15197 1021 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 GNA14O95837 355 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 ASNSP08243 561 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 CLCN6P51797 869 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 CCDC42Q96M95 316 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 EHMT1Q9H9B1 1298 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 FEM1BQ9UK73 627 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 PLAGL2Q9UPG8 496 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 EIF3CLB5ME19 914 aaKnown RBP22.36■■□□□ 1.17
VSX1-202ENST00000376709 KRT86O43790 486 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 ZNF280AP59817 542 aaPredicted RBP22.36■■□□□ 1.17
VSX1-202ENST00000376709 RSRC2Q7L4I2 434 aaKnown RBP22.36■■□□□ 1.17
VSX1-202ENST00000376709 SRGAP1Q7Z6B7 1085 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 GPR161Q8N6U8 529 aaKnown RBP22.36■■□□□ 1.17
VSX1-202ENST00000376709 CEP112Q8N8E3 955 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 EIF3CQ99613 913 aaKnown RBP22.36■■□□□ 1.17
VSX1-202ENST00000376709 POLR3CQ9BUI4 534 aaPredicted RBP22.36■■□□□ 1.17
VSX1-202ENST00000376709 BHMT2Q9H2M3 363 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 KCTD10Q9H3F6 313 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 ZSWIM4Q9H7M6 989 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 FBXO28Q9NVF7 368 aa22.36■■□□□ 1.17
VSX1-202ENST00000376709 PLA2G6O60733 806 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 CHMP4BP1P59074 171 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 UBXN2AP68543 259 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 LRCH2Q5VUJ6 765 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 SMAP1Q8IYB5 467 aaPredicted RBP22.35■■□□□ 1.17
VSX1-202ENST00000376709 NEK11Q8NG66 645 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 JAKMIP2Q96AA8 810 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 WDR18Q9BV38 432 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 TFR2Q9UP52 801 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 RABGAP1Q9Y3P9 1069 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 EML1O00423 815 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 HNRNPH3P31942 346 aaKnown RBP22.35■■□□□ 1.17
VSX1-202ENST00000376709 GMPSP49915 693 aaPredicted RBP22.35■■□□□ 1.17
VSX1-202ENST00000376709 PPP4R3CPQ6ZMV5 832 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 CCDC155Q8N6L0 562 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 EPC1Q9H2F5 836 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 RGL1Q9NZL6 768 aa22.35■■□□□ 1.17
VSX1-202ENST00000376709 PUF60Q9UHX1 559 aaKnown RBP22.35■■□□□ 1.17
VSX1-202ENST00000376709 CHMP2AO43633 222 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 MAP3K10Q02779 954 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 ADAM9Q13443 819 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 SPA17Q15506 151 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 RRAGAQ7L523 313 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 CACNA2D4Q7Z3S7 1137 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 SFR1Q86XK3 245 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 EHBP1Q8NDI1 1231 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 RABGGTAQ92696 567 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 SGIP1Q9BQI5 828 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 GJA3Q9Y6H8 435 aa22.34■■□□□ 1.17
VSX1-202ENST00000376709 ASTN2O75129 1339 aaPredicted RBP22.34■■□□□ 1.17
VSX1-202ENST00000376709 CASP5P51878 434 aa22.33■■□□□ 1.17
VSX1-202ENST00000376709 PRELPP51888 382 aa22.33■■□□□ 1.17
VSX1-202ENST00000376709 LDHDQ86WU2 507 aa22.33■■□□□ 1.17
VSX1-202ENST00000376709 MICALL2Q8IY33 904 aa22.33■■□□□ 1.17
VSX1-202ENST00000376709 SMCR8Q8TEV9 937 aaPredicted RBP22.33■■□□□ 1.17
VSX1-202ENST00000376709 ZNF341Q9BYN7 854 aa22.33■■□□□ 1.17
VSX1-202ENST00000376709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.33■■□□□ 1.17
VSX1-202ENST00000376709 LRRC53A6NM62 1247 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 TBCAO75347 108 aaKnown RBP22.33■■□□□ 1.16
VSX1-202ENST00000376709 PLEKP08567 350 aaPredicted RBP22.33■■□□□ 1.16
VSX1-202ENST00000376709 RPS12P25398 132 aaKnown RBP22.33■■□□□ 1.16
VSX1-202ENST00000376709 CYP27A1Q02318 531 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 EDRF1Q3B7T1 1238 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 ZNF662Q6ZS27 426 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 OTOP1Q7RTM1 612 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 SAMD7Q7Z3H4 446 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 DEF6Q9H4E7 631 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 CD2APQ9Y5K6 639 aa22.33■■□□□ 1.16
VSX1-202ENST00000376709 ATAD5Q96QE3 1844 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 PHF20L1A8MW92 1017 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 CETN3O15182 167 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 EYA4O95677 639 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 CTTNQ14247 550 aaKnown RBP22.32■■□□□ 1.16
VSX1-202ENST00000376709 TBC1D10BQ4KMP7 808 aaPredicted RBP22.32■■□□□ 1.16
VSX1-202ENST00000376709 CEP55Q53EZ4 464 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 TMCO3Q6UWJ1 677 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 SLC30A10Q6XR72 485 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 TEPSINQ96N21 525 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 GAS7O60861 476 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 PSMD10O75832 226 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 NR2F2P24468 414 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 EPS15P42566 896 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 MARSP56192 900 aaKnown RBP22.32■■□□□ 1.16
VSX1-202ENST00000376709 TRIM59Q8IWR1 403 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 TPH2Q8IWU9 490 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 KCTD17Q8N5Z5 321 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 RUSC1Q9BVN2 902 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 ARHGAP20Q9P2F6 1191 aa22.32■■□□□ 1.16
VSX1-202ENST00000376709 PPP2R5CQ13362 524 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 WHAMMP3Q1A5X7 153 aa22.31■■□□□ 1.16
VSX1-202ENST00000376709 KNOP1Q1ED39 458 aaKnown RBP22.31■■□□□ 1.16
VSX1-202ENST00000376709 PIGOQ8TEQ8 1089 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms