RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 RASA3Q14644 834 aa12.22□□□□□ -0.45
HDAC6-203ENST00000376619 NBPF9Q3BBW0 867 aa12.22□□□□□ -0.45
HDAC6-203ENST00000376619 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
HDAC6-203ENST00000376619 NOA1Q8NC60 698 aaKnown RBP12.22□□□□□ -0.45
HDAC6-203ENST00000376619 DHX36Q9H2U1 1008 aaKnown RBP12.22□□□□□ -0.45
HDAC6-203ENST00000376619 RNF225M0QZC1 329 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-203ENST00000376619 KRT19P08727 400 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 RPS6KA1Q15418 735 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 RAD54LQ92698 747 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 BPIFA3Q9BQP9 254 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 BUB1BO60566 1050 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-203ENST00000376619 ZBED4O75132 1171 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 GCLMP48507 274 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 ERVK-24P63145 666 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 GADL1Q6ZQY3 521 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 FAM186BQ8IYM0 893 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 LACRTQ9GZZ8 138 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 SYNCQ9H7C4 482 aa12.21□□□□□ -0.45
HDAC6-203ENST00000376619 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.45
HDAC6-203ENST00000376619 CWC15Q9P013 229 aaKnown RBP12.21□□□□□ -0.45
HDAC6-203ENST00000376619 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.46
HDAC6-203ENST00000376619 TM4SF1P30408 202 aa12.21□□□□□ -0.46
HDAC6-203ENST00000376619 ZBED6P86452 979 aa12.21□□□□□ -0.46
HDAC6-203ENST00000376619 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.46
HDAC6-203ENST00000376619 REXO1L1PQ8IX06 675 aa12.21□□□□□ -0.46
HDAC6-203ENST00000376619 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.46
HDAC6-203ENST00000376619 MRPL11Q9Y3B7 192 aaKnown RBP12.21□□□□□ -0.46
HDAC6-203ENST00000376619 SLC9A1P19634 815 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 MESDQ14696 234 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 MTERF2Q49AM1 385 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 CFAP58Q5T655 872 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 UNC13DQ70J99 1090 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 SLFN12Q8IYM2 578 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 PRR12Q9ULL5 1215 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 DISP2A7MBM2 1401 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
HDAC6-203ENST00000376619 MYBP10242 640 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 SAAL1Q96ER3 474 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 PANX2Q96RD6 677 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 SH2D4AQ9H788 454 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 PTPN22Q9Y2R2 807 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 HNRNPDLO14979 420 aaKnown RBP12.2□□□□□ -0.46
HDAC6-203ENST00000376619 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-203ENST00000376619 CCDC93Q567U6 631 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 POMGNT1Q8WZA1 660 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
HDAC6-203ENST00000376619 LAD1O00515 517 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 RHBDL3P58872 404 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 PURBQ96QR8 312 aaKnown RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 MTRQ99707 1265 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 KIFC3Q9BVG8 833 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 GLIS2Q9BZE0 524 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 LARSQ9P2J5 1176 aaKnown RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 SEPT9Q9UHD8 586 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 KDM3AQ9Y4C1 1321 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 SLC16A4O15374 487 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 CD19P15391 556 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 DPEP1P16444 411 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 NPEPPSP55786 919 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 ZNF211Q13398 564 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 GBP6Q6ZN66 633 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 SELENOOQ9BVL4 669 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 TEKT3Q9BXF9 490 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 SH3GLB2Q9NR46 395 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 TMOD4Q9NZQ9 345 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 SMTNP53814 917 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 HMGCS2P54868 508 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 PPP4CP60510 307 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 GRB10Q13322 594 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 CIAPIN1Q6FI81 312 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 PDXDC2PQ6P474 469 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 IL17RAQ96F46 866 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 FAM84AQ96KN4 292 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 UBE2TQ9NPD8 197 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 GOLGA6BA6NDN3 693 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 POTEB2H3BUK9 544 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 NOP56O00567 594 aaKnown RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 VSNL1P62760 191 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 KCNA1Q09470 495 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 GSTA5Q7RTV2 222 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
HDAC6-203ENST00000376619 ZKSCAN4Q969J2 545 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-203ENST00000376619 MMS19Q96T76 1030 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms