RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 MYO1FO00160 1098 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 IL1R1P14778 569 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 GNA11P29992 359 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 PTPROQ16827 1216 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 SLC9C1Q4G0N8 1177 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 KLHL7Q8IXQ5 586 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 SLC16A10Q8TF71 515 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 MTMR9Q96QG7 549 aa15.54■□□□□ 0.08
CLCNKA-202ENST00000375692 SSU72P8A0A1W2PR75 194 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 TRAF5O00463 557 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 EDIL3O43854 480 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 FGFR1OPO95684 399 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 PAK2Q13177 524 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 ECM1Q16610 540 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 SFMBT2Q5VUG0 894 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 MCTP2Q6DN12 878 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 DNAAF5Q86Y56 855 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 LSM14BQ9BX40 385 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 FGFBP2Q9BYJ0 223 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 DBNDD1Q9H9R9 158 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 A0A087X0T9 212 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 FAM228BP0C875 321 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 NAB2Q15742 525 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 CCDC40Q4G0X9 1142 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 KDM7AQ6ZMT4 941 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 REXO1Q8N1G1 1221 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 OTUD6BQ8N6M0 293 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 RAD54LQ92698 747 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 ADAMTS1Q9UHI8 967 aa15.53■□□□□ 0.08
CLCNKA-202ENST00000375692 RAD51CO43502 376 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 LDHBP07195 334 aaKnown RBP15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 NR1D1P20393 614 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 MNAT1P51948 309 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 KIAA0753Q2KHM9 967 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 MFSD14BQ5SR56 506 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 NAA35Q5VZE5 725 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 B4GALNT4Q76KP1 1039 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 WDR66Q8TBY9 1149 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 SNX29Q8TEQ0 813 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 CNKSR1Q969H4 720 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 COA7Q96BR5 231 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 CENPHQ9H3R5 247 aa15.52■□□□□ 0.08
CLCNKA-202ENST00000375692 RBAK-RBAKDNI3L0D1 243 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 SERPING1P05155 500 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 MEI1Q5TIA1 1274 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 MAATS1Q7Z4T9 603 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 LZTS2Q9BRK4 669 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 EPN3Q9H201 632 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 STK17AQ9UEE5 414 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 SEC63Q9UGP8 760 aaKnown RBP15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 TSKSQ9UJT2 592 aa15.52■□□□□ 0.07
CLCNKA-202ENST00000375692 HPDP32754 393 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 FNTAP49354 379 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 RAPGEF1Q13905 1077 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 CDC37Q16543 378 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 INPP4AQ96PE3 977 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 TSG101Q99816 390 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 CEP72Q9P209 647 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 PLAAQ9Y263 795 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 LTBP1Q14766 1721 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 ABCB11O95342 1321 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 USP17L5A8MUK1 530 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 F8W031 263 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 MEFVO15553 781 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 KIAA0754O94854 1291 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 PTGISQ16647 500 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 CEP85LQ5SZL2 805 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 MYOCDQ8IZQ8 938 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 OR2W6PQ8NHA6 318 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 ZNF473Q8WTR7 871 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 ATP6V1G3Q96LB4 118 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 EYA3Q99504 573 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 RNF14Q9UBS8 474 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 QSER1Q2KHR3 1735 aa15.51■□□□□ 0.07
CLCNKA-202ENST00000375692 FRMPD2Q68DX3 1309 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 GRID2IPA4D2P6 1211 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 PPP1R37O75864 691 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 HDLBPQ00341 1268 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 CACNB1Q02641 598 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 DDX42Q86XP3 938 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 CERS5Q8N5B7 392 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 CCT8L2Q96SF2 557 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 EDEM3Q9BZQ6 932 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 LRRC37AA6NMS7 1700 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 H0YHG0 523 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 FKBP3Q00688 224 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 COASYQ13057 564 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 HLTFQ14527 1009 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 SLC18A3Q16572 532 aa15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 RNF187Q5TA31 235 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-202ENST00000375692 C10orf71Q711Q0 1435 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms