RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 EVA1CP58658 441 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 ABCE1P61221 599 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 RBL2Q08999 1139 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 RGS21Q2M5E4 152 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 RAB44Q7Z6P3 723 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 IPO11Q9UI26 975 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 DSEQ9UL01 958 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 IFIT5Q13325 482 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 WLSQ5T9L3 541 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 WDR93Q6P2C0 686 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 MTA3Q9BTC8 594 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 AK5Q9Y6K8 562 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 IFNA8P32881 189 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 PPP2R5CQ13362 524 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 ACAD11Q709F0 780 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 NQO1P15559 274 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 ZSWIM6Q9HCJ5 1215 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 NSMCE4AQ9NXX6 385 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 FHOD1Q9Y613 1164 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 ZBBXA8MT70 800 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 TRIM17Q9Y577 477 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 hCG_2014768A0A024R1R8 64 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 BAIAP3O94812 1187 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 SLC39A14Q15043 492 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 EIF1ADQ8N9N8 165 aaKnown RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.11□□□□□ -1.27
UBR4-204ENST00000375254 PBXIP1Q96AQ6 731 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 TRPV6Q9H1D0 765 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 SMARCAD1Q9H4L7 1026 aa7.11□□□□□ -1.27
UBR4-204ENST00000375254 KRT14P02533 472 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 IFNA16P05015 189 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 MYBL2P10244 700 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SMARCA1P28370 1054 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 STAT4Q14765 748 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 DCUN1D2Q6PH85 259 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 INPP5DQ92835 1189 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 DAB2P98082 770 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 POLKQ9UBT6 870 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 HBS1LQ9Y450 684 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 NOP56O00567 594 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 ZBTB39O15060 712 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 RGS20O76081 388 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 RPL5P46777 297 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 XIAPP98170 497 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 BFSP1Q12934 665 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 ANGPT2O15123 496 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SPIDRQ14159 915 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 LBRQ14739 615 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 NEK8Q86SG6 692 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 PATL1Q86TB9 770 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 COL23A1Q86Y22 540 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 RWDD2AQ9UIY3 292 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 RAB25P57735 213 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 GSTA3Q16772 222 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 UBE3BQ7Z3V4 1068 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 OTULINQ96BN8 352 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 FKBP6O75344 327 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 ALOX5P09917 674 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 HIC1Q14526 733 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SNX17Q15036 470 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 C15orf59Q2T9L4 293 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 ZKSCAN4Q969J2 545 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 LRPAP1P30533 357 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 TOGARAM2Q6ZUX3 1019 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SIX5Q8N196 739 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 WWP1Q9H0M0 922 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 ATXN2Q99700 1313 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 SYNRGQ9UMZ2 1314 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 GOLGA8JA6NMD2 632 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 MAP3K13O43283 966 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 CHRM1P11229 460 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 PRLRP16471 622 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 HSP90AA4PQ58FG1 418 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SCAIQ8N9R8 606 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 TAF1DQ9H5J8 278 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 NRBP1Q9UHY1 535 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 CCDC162PA2VCL2 907 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 LAD1O00515 517 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 NCF2P19878 526 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 RAP1GAPP47736 663 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 CDC37Q16543 378 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 HAUS3Q68CZ6 603 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 SYTL5Q8TDW5 730 aaPredicted RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 LPIN2Q92539 896 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 MTMR6Q9Y217 621 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 PMS2P54278 862 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 ZFP1Q6P2D0 407 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 GNB5O14775 395 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 GRM1Q13255 1194 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 TRMT5Q32P41 509 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 TAF4O00268 1085 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 VWA5AO00534 786 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 TBC1D4O60343 1298 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 WBP4O75554 376 aaKnown RBP7.1□□□□□ -1.27
UBR4-204ENST00000375254 HAUS5O94927 633 aa7.1□□□□□ -1.27
UBR4-204ENST00000375254 ABCB1P08183 1280 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms