RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SPIRE1Q08AE8 756 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 MTF1Q14872 753 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 ZSCAN26Q16670 478 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 NEK11Q8NG66 645 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 LENG9Q96B70 501 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 EPN1Q9Y6I3 576 aaPredicted RBP9.08□□□□□ -0.96
UBR4-202ENST00000375224 COL4A5P29400 1685 aa9.08□□□□□ -0.96
UBR4-202ENST00000375224 FAM86B1E9PN63 330 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 OPLAHO14841 1288 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 MSH4O15457 936 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 MED24O75448 989 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CFBP00751 764 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 FAM86B2P0C5J1 330 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CYP11B2P19099 503 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CYLC1P35663 651 aaPredicted RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 KRT83P78385 493 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 HERC4Q5GLZ8 1057 aaPredicted RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 ARHGAP27Q6ZUM4 889 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 SYT2Q8N9I0 419 aaPredicted RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 HPS3Q969F9 1004 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 FRMD3A2A2Y4 597 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 IPO7O95373 1038 aaKnown RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 HOXA13P31271 388 aaPredicted RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 KIF4BQ2VIQ3 1234 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CCDC174Q6PII3 467 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 MIGA2Q7L4E1 593 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CATSPER3Q86XQ3 398 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CCDC125Q86Z20 511 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CCDC170Q8IYT3 715 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 SAMD3Q8N6K7 520 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 LPAR1Q92633 364 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 GJA10Q969M2 543 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 EDEM3Q9BZQ6 932 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 DEFB129Q9H1M3 183 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 NDST4Q9H3R1 872 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 TUFT1Q9NNX1 390 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 PGAP2Q9UHJ9 254 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 STAT3P40763 770 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 ZNF280AP59817 542 aaPredicted RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 ERVK-24P63145 666 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 CDK17Q00537 523 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 MEA1Q16626 185 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 MIIPQ5JXC2 388 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 KRT26Q7Z3Y9 468 aa9.07□□□□□ -0.96
UBR4-202ENST00000375224 P2RX7Q99572 595 aaKnown RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 MRPL44Q9H9J2 332 aaKnown RBP9.07□□□□□ -0.96
UBR4-202ENST00000375224 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 WDR46O15213 610 aaKnown RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 NDUFA10O95299 355 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 TUBB4BP68371 445 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 MAP3K9P80192 1104 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 TMEM132AQ24JP5 1023 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 KIAA1755Q5JYT7 1200 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 MCF2L2Q86YR7 1114 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 WDR11Q9BZH6 1224 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 TTYH3Q9C0H2 523 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 LZTFL1Q9NQ48 299 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 RRP15Q9Y3B9 282 aaKnown RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 COL4A3BPQ9Y5P4 624 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 TRAF5O00463 557 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 POLR3GO15318 223 aaPredicted RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 EYA4O95677 639 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 EDRF1Q3B7T1 1238 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 ZNF662Q6ZS27 426 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 LRRC55Q6ZSA7 311 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 LDHDQ86WU2 507 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 PRPF38AQ8NAV1 312 aaKnown RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 HOOK2Q96ED9 719 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 NUCKS1Q9H1E3 243 aaKnown RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 EMILIN3Q9NT22 766 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 MAP3K20Q9NYL2 800 aaKnown RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 VAV3Q9UKW4 847 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 IGLV3-22A0A075B6J6 115 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 POTEFA5A3E0 1075 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 EFCAB8A8MWE9 144 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 POTEIP0CG38 1075 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 SPATA31C1P0DKV0 1188 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 GAP43P17677 238 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 PPP2R5CQ13362 524 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 RASA3Q14644 834 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 CCDC40Q4G0X9 1142 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 ZCWPW2Q504Y3 356 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 POTEGQ6S5H5 508 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 POTEEQ6S8J3 1075 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 GIMAP7Q8NHV1 300 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 PIK3R5Q8WYR1 880 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 UBXN4Q92575 508 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 EIF2AK1Q9BQI3 630 aaKnown RBP9.06□□□□□ -0.96
UBR4-202ENST00000375224 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 HAUS4Q9H6D7 363 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 FAM184BQ9ULE4 1060 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 PCDHA2Q9Y5H9 948 aa9.06□□□□□ -0.96
UBR4-202ENST00000375224 RNF225M0QZC1 329 aaPredicted RBP9.05□□□□□ -0.96
UBR4-202ENST00000375224 CTNND1O60716 968 aaKnown RBP9.05□□□□□ -0.96
UBR4-202ENST00000375224 ICAM1P05362 532 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 FDX1P10109 184 aa9.05□□□□□ -0.96
UBR4-202ENST00000375224 PTGER2P43116 358 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms