RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 IPO5O00410 1097 aaKnown RBP19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 KRT18P05783 430 aaKnown RBP19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CASP14P31944 242 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 HMGCS2P54868 508 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CYP4A11Q02928 519 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PABPC4Q13310 644 aaKnown RBP eCLIP19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 EPHA7Q15375 998 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 GLIS3Q8NEA6 775 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TRERF1Q96PN7 1200 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MAF1Q9H063 256 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 AFG3L2Q9Y4W6 797 aa19.99■□□□□ 0.79
HLA-DQB1-201ENST00000374943 NPHP3-ACAD11A0A0J9YXS1 232 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 DDNO94850 711 aaPredicted RBP19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 SLITRK3O94933 977 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RPS6P62753 249 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 HERC4Q5GLZ8 1057 aaPredicted RBP19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 SH3D19Q5HYK7 790 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CREBRFQ8IUR6 639 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 IL31RAQ8NI17 732 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 UNC45AQ9H3U1 944 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RGL1Q9NZL6 768 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 FZD1Q9UP38 647 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PAXBP1Q9Y5B6 917 aa19.98■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ZSCAN12O43309 604 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 USP2O75604 605 aaPredicted RBP19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MTIF2P46199 727 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 LRRC41Q15345 812 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MIIPQ5JXC2 388 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CATSPERGQ6ZRH7 1159 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 DYDC2Q96IM9 177 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 REEP2Q9BRK0 252 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 BHMT2Q9H2M3 363 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 JADE2Q9NQC1 790 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 HOMER2Q9NSB8 354 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TMOD4Q9NZQ9 345 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RNF181Q9P0P0 153 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 GRIN3BO60391 1043 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 GTF2F1P35269 517 aaKnown RBP eCLIP19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 COG2Q14746 738 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TKFCQ3LXA3 575 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 XRRA1Q6P2D8 792 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 SLC30A10Q6XR72 485 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RNF207Q6ZRF8 634 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ZC3H3Q8IXZ2 948 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 WNK4Q96J92 1243 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 KCNH7Q9NS40 1196 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RNF146Q9NTX7 359 aa19.97■□□□□ 0.79
HLA-DQB1-201ENST00000374943 UQCRHLA0A096LP55 91 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 GOLGA6L9A6NEM1 432 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 B4DLN1 442 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 UQCRHP07919 91 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 MRPS9P82933 396 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CTTNQ14247 550 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PGM5Q15124 567 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RETREG2Q8NC44 543 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 RBM46Q8TBY0 533 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 SCFD1Q8WVM8 642 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CEP63Q96MT8 703 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 TAAR1Q96RJ0 339 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ERGIC2Q96RQ1 377 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 NOC4LQ9BVI4 516 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 FGFBP2Q9BYJ0 223 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 KCTD10Q9H3F6 313 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 AGO4Q9HCK5 861 aaKnown RBP19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ABHD10Q9NUJ1 306 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 ZNF214Q9UL59 606 aaPredicted RBP19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 PPP2R2CQ9Y2T4 447 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 SNCAIPQ9Y6H5 919 aa19.96■□□□□ 0.79
HLA-DQB1-201ENST00000374943 CHMP2AO43633 222 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 GAP43P17677 238 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 FKBP3Q00688 224 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 MAN2A1Q16706 1144 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RINT1Q6NUQ1 792 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 EPM2AIP1Q7L775 607 aaPredicted RBP19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 REXO1L1PQ8IX06 675 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CPLX3Q8WVH0 158 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 IQCDQ96DY2 449 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 NACC1Q96RE7 527 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 NUP58Q9BVL2 599 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 RUSC1Q9BVN2 902 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PXMP2Q9NR77 195 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 KCND2Q9NZV8 630 aa19.95■□□□□ 0.78
HLA-DQB1-201ENST00000374943 DHX15O43143 795 aaKnown RBP19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 MAP3K9P80192 1104 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 BMT2Q1RMZ1 405 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 FIGNQ5HY92 759 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 TPH2Q8IWU9 490 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 DCPSQ96C86 337 aaKnown RBP19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 PDCD2LQ9BRP1 358 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 CAPN11Q9UMQ6 739 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 COL4A3BPQ9Y5P4 624 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 GNA14O95837 355 aa19.94■□□□□ 0.78
HLA-DQB1-201ENST00000374943 MARSP56192 900 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms