RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PPP1R37O75864 691 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 GNAQP50148 359 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 SBK1Q52WX2 424 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 CEP85LQ5SZL2 805 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 PDXDC1Q6P996 788 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 KLHL7Q8IXQ5 586 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 PRPF38AQ8NAV1 312 aaKnown RBP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 DBNDD1Q9H9R9 158 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 GDF3Q9NR23 364 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 MAD2L2Q9UI95 211 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 PJA2O43164 708 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 FGFR1OPO95684 399 aaKnown RBP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 HDLBPQ00341 1268 aaKnown RBP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 EHHADHQ08426 723 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 NONOQ15233 471 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 LRRC41Q15345 812 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 AOC3Q16853 763 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 DACT2Q5SW24 774 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 CERS5Q8N5B7 392 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 E7EVH7 732 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 GRM4Q14833 912 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 DIXDC1Q155Q3 683 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 SLC9C1Q4G0N8 1177 aa12.2□□□□□ -0.46
CCDC40-203ENST00000374877 PPANQ9NQ55 473 aaKnown RBP12.2□□□□□ -0.46
CCDC40-203ENST00000374877 MYMKA6NI61 221 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 MAP2K2P36507 400 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 IFT88Q13099 833 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 PTGISQ16647 500 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 HHIPL2Q6UWX4 724 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 DGKHQ86XP1 1220 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 SPATS2Q86XZ4 545 aaKnown RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 ATP6V1G3Q96LB4 118 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 CCT8L2Q96SF2 557 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 NLRP14Q86W24 1093 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 DAGLBQ8NCG7 672 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 JPH2Q9BR39 696 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 VAT1LQ9HCJ6 419 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 PLAAQ9Y263 795 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 ZNF646O15015 1829 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 KLRC1P26715 233 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 MDH1P40925 334 aaKnown RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 BTDP43251 543 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 FNTAP49354 379 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 ASTE1Q2TB18 679 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 CCDC40Q4G0X9 1142 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 SFMBT2Q5VUG0 894 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 KRT25Q7Z3Z0 450 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 MYCBPAPQ8TBZ2 947 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 PIK3R5Q8WYR1 880 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 LUC7LQ9NQ29 371 aaKnown RBP12.19□□□□□ -0.46
CCDC40-203ENST00000374877 RNF14Q9UBS8 474 aa12.19□□□□□ -0.46
CCDC40-203ENST00000374877 SSU72P8A0A1W2PR75 194 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 FSBPO95073 299 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 PTPROQ16827 1216 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 GLIS3Q8NEA6 775 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 TBC1D5Q92609 795 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 MYO3BQ8WXR4 1341 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 RAD51CO43502 376 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 POLR2FP61218 127 aaKnown RBP12.18□□□□□ -0.46
CCDC40-203ENST00000374877 UNC13DQ70J99 1090 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 TBCKQ8TEA7 893 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 TSG101Q99816 390 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 DAGLAQ9Y4D2 1042 aa12.18□□□□□ -0.46
CCDC40-203ENST00000374877 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 RAPGEF1Q13905 1077 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 KIAA0753Q2KHM9 967 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 SLC44A5Q8NCS7 719 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 SH3RF3Q8TEJ3 882 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 LARP4BQ92615 738 aaKnown RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 LSM14BQ9BX40 385 aaKnown RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 BCCIPQ9P287 314 aaKnown RBP eCLIP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 BIN2Q9UBW5 565 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 HMGB1P1B2RPK0 211 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 TNNC1P63316 161 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 LRRC63Q05C16 580 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 KCNMA1Q12791 1236 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 GRB10Q13322 594 aa12.17□□□□□ -0.46
CCDC40-203ENST00000374877 KCTD19Q17RG1 926 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-203ENST00000374877 FAM83BQ5T0W9 1011 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms