RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC40-202ENST00000374876 MGAMO43451 1857 aa17.34■□□□□ 0.37
CCDC40-202ENST00000374876 KCNJ18B7U540 433 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 MAPK4P31152 587 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 SEMA3FQ13275 785 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 ORC2Q13416 577 aaPredicted RBP17.33■□□□□ 0.37
CCDC40-202ENST00000374876 KCNJ12Q14500 433 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 KMT5BQ4FZB7 885 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 JAKMIP3Q5VZ66 844 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 RIOX2Q8IUF8 465 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 CNGA4Q8IV77 575 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 ADSSL1Q8N142 457 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 COA7Q96BR5 231 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 VPS16Q9H269 839 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 HOMER2Q9NSB8 354 aa17.33■□□□□ 0.37
CCDC40-202ENST00000374876 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 MFAP3LO75121 409 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 CCDC175P0C221 793 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 FDX1P10109 184 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 PLCG1P19174 1290 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 COPB1P53618 953 aaKnown RBP17.33■□□□□ 0.36
CCDC40-202ENST00000374876 PRKCZQ05513 592 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 ELF2Q15723 593 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 PLEKHH3Q7Z736 793 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 DESI2Q9BSY9 194 aa17.33■□□□□ 0.36
CCDC40-202ENST00000374876 SOWAHDA6NJG2 315 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 ATP2A1O14983 1001 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 URI1O94763 535 aaPredicted RBP17.32■□□□□ 0.36
CCDC40-202ENST00000374876 CASP14P31944 242 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 GNG11P61952 73 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 ARHGEF6Q15052 776 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 UBE2Q2Q8WVN8 375 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 CCDC47Q96A33 483 aaKnown RBP17.32■□□□□ 0.36
CCDC40-202ENST00000374876 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 TAB2Q9NYJ8 693 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
CCDC40-202ENST00000374876 PSMA7O14818 248 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 RHOBTB3O94955 611 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 SLC25A27O95847 323 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 GYPCP04921 128 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 ALAS1P13196 640 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 TECP42680 631 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 ADCY7P51828 1080 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-202ENST00000374876 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-202ENST00000374876 SRRTQ9BXP5 876 aaKnown RBP17.31■□□□□ 0.36
CCDC40-202ENST00000374876 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 GJD2Q9UKL4 321 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 KLRC4O43908 158 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 ICAM1P05362 532 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 HOXD10P28358 340 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 CASQ1P31415 396 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 FLT3LGP49771 235 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 OAZ1P54368 228 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 MTF1Q14872 753 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
CCDC40-202ENST00000374876 SHCBP1Q8NEM2 672 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 MROH8Q9H579 483 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 PTPN22Q9Y2R2 807 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 CENPFP49454 3210 aa17.31■□□□□ 0.36
CCDC40-202ENST00000374876 TRIM49BA6NDI0 452 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 GNRH1P01148 92 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 TRIM14Q14142 442 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 USH1GQ495M9 461 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 POTEDQ86YR6 584 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 CALML4Q96GE6 196 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 TRERF1Q96PN7 1200 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 MCOLN1Q9GZU1 580 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 IVNS1ABPQ9Y6Y0 642 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 FANCGO15287 622 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 FXR1P51114 621 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC40-202ENST00000374876 AMPD3Q01432 767 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 MNS1Q8NEH6 495 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 LRRC15Q8TF66 581 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 PTCH2Q9Y6C5 1203 aa17.3■□□□□ 0.36
CCDC40-202ENST00000374876 CYP2B6P20813 491 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
CCDC40-202ENST00000374876 TXKP42681 527 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 UBXN1Q04323 297 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 CALCRLQ16602 461 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 ERCC6LQ2NKX8 1250 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 MUM1L1Q5H9M0 696 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 RAD9BQ6WBX8 426 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 NUDT12Q9BQG2 462 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 TRIM9Q9C026 710 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 THAP9Q9H5L6 903 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 EXOC1Q9NV70 894 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 ADGRG1Q9Y653 693 aa17.29■□□□□ 0.36
CCDC40-202ENST00000374876 PNMA6FA0A0J9YX94 578 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 ZBTB5O15062 677 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
CCDC40-202ENST00000374876 ASIC1P78348 528 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 CBX1P83916 185 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 MORN1Q5T089 497 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 LRRN4CLQ8ND94 238 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 RAET1EQ8TD07 263 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
CCDC40-202ENST00000374876 DHTKD1Q96HY7 919 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms