RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 DCP1AQ9NPI6 582 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 COL4A3BPQ9Y5P4 624 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 LMNB1P20700 586 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 RBL2Q08999 1139 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 ZBTB17Q13105 803 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 TSGA10IPQ3SY00 556 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 KCTD1Q719H9 257 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 PLA2G4DQ86XP0 818 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 CDKL2Q92772 493 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 MAGOHBQ96A72 148 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 ALDH8A1Q9H2A2 487 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 CNOT10Q9H9A5 744 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 CACYBPQ9HB71 228 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 RNF14Q9UBS8 474 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 AP5Z1O43299 807 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 DNAJC8O75937 253 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 NTSR2O95665 410 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 ASPHQ12797 758 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 DPCR1Q3MIW9 517 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 JADE1Q6IE81 842 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 SCYL2Q6P3W7 929 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 LRGUKQ96M69 825 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 PIGSQ96S52 555 aa13.32□□□□□ -0.28
NPLOC4-202ENST00000374747 POC1B-GALNT4F8VUJ3 575 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 INHBAP08476 426 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 MX2P20592 715 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 CLCN6P51797 869 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 RESTQ13127 1097 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 C11orf57Q6ZUT1 292 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 LINC00301Q8NCQ3 95 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 TEKT3Q9BXF9 490 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 JRKLQ9Y4A0 524 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 HMGB1P1B2RPK0 211 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 GSTA1P08263 222 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 GSTA2P09210 222 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ARHGEF18Q6ZSZ5 1173 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 TMEM179Q6ZVK1 233 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 KSR1Q8IVT5 923 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 MB21D2Q8IYB1 491 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ANKRD35Q8N283 1001 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 PPM1KQ8N3J5 372 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 PARD6BQ9BYG5 372 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 MIS12Q9H081 205 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 XAB2Q9HCS7 855 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 SUGT1Q9Y2Z0 365 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 GOLGA8QA0A0J9YX86 632 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 GOLGA8OA6NCC3 632 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 GOLGA8NF8WBI6 632 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 K7ENM7 598 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ECE2O60344 883 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 SCARF1Q14162 830 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 TRIM42Q8IWZ5 723 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 SPICE1Q8N0Z3 855 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 BAG5Q9UL15 447 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 RGPD1P0DJD0 1748 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 PGRMC1O00264 195 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ZMYND10O75800 440 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 TTC4O95801 387 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 NSFP46459 744 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 YWHAGP61981 247 aaKnown RBP eCLIP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ANKRD20A4Q4UJ75 823 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ANKRD20A8PQ5CZ79 823 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ANKRD20A2Q5SQ80 823 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 ANKRD20A1Q5TYW2 823 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 USP17L2Q6R6M4 530 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 PDZD4Q76G19 769 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 SLC5A4Q9NY91 659 aa13.31□□□□□ -0.28
NPLOC4-202ENST00000374747 POLR2BP30876 1174 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 FAM102BQ5T8I3 360 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 GPHNQ9NQX3 736 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 NEDD4P46934 1319 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 KIF11P52732 1056 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 RCN2Q14257 317 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 ZKSCAN8Q15776 578 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 PRR5LQ6MZQ0 368 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 LRRC43Q8N309 656 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 SPDL1Q96EA4 605 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 NACA2Q9H009 215 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 PTPN22Q9Y2R2 807 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 STK36Q9NRP7 1315 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 ECM2O94769 699 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 RFX5P48382 616 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 YARSP54577 528 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 NNTQ13423 1086 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 AOC3Q16853 763 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 CXorf38Q8TB03 319 aa13.3□□□□□ -0.28
NPLOC4-202ENST00000374747 DHTKD1Q96HY7 919 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms