RNA–Protein interactions for RNA: ENST00000374263.7

SUSD1-202, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SUSD1, Length 2,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-202ENST00000374263 ASIC1P78348 528 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 COL23A1Q86Y22 540 aaPredicted RBP22.23■■□□□ 1.15
SUSD1-202ENST00000374263 KLHL7Q8IXQ5 586 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 NOC3LQ8WTT2 800 aaKnown RBP22.23■■□□□ 1.15
SUSD1-202ENST00000374263 DHTKD1Q96HY7 919 aaPredicted RBP22.23■■□□□ 1.15
SUSD1-202ENST00000374263 HAUS2Q9NVX0 235 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 GOLGA6L7A0A1B0GV03 622 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 FRMD3A2A2Y4 597 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 ADRA2BP18089 450 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 TRAPPC10P48553 1259 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 HLTFQ14527 1009 aaKnown RBP eCLIP22.23■■□□□ 1.15
SUSD1-202ENST00000374263 QPCTQ16769 361 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 TDRD12Q587J7 1177 aaKnown RBP22.23■■□□□ 1.15
SUSD1-202ENST00000374263 ARL6IP4Q66PJ3 421 aaKnown RBP22.23■■□□□ 1.15
SUSD1-202ENST00000374263 NEDD1Q8NHV4 660 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 PAGR1Q9BTK6 254 aa22.23■■□□□ 1.15
SUSD1-202ENST00000374263 DNM1LO00429 736 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 KIF1CO43896 1103 aaKnown RBP22.22■■□□□ 1.15
SUSD1-202ENST00000374263 KIRREL3Q8IZU9 778 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 CCDC155Q8N6L0 562 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 NOX5Q96PH1 765 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 KBTBD4Q9NVX7 518 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 CASZ1Q86V15 1759 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 A0A1W2PQJ5 194 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 TAL1P17542 331 aaPredicted RBP22.22■■□□□ 1.15
SUSD1-202ENST00000374263 SF3A3Q12874 501 aaKnown RBP eCLIP22.22■■□□□ 1.15
SUSD1-202ENST00000374263 C6orf89Q6UWU4 347 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 OSBPL7Q9BZF2 842 aa22.22■■□□□ 1.15
SUSD1-202ENST00000374263 PLCG1P19174 1290 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 FAM114A1Q8IWE2 563 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 DHX37Q8IY37 1157 aaKnown RBP22.21■■□□□ 1.15
SUSD1-202ENST00000374263 CERKQ8TCT0 537 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 SLC39A2Q9NP94 309 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 DDX20Q9UHI6 824 aaKnown RBP22.21■■□□□ 1.15
SUSD1-202ENST00000374263 PLCG2P16885 1265 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 ENOX2Q16206 610 aaKnown RBP22.21■■□□□ 1.15
SUSD1-202ENST00000374263 PTPROQ16827 1216 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 GLE1Q53GS7 698 aaKnown RBP22.21■■□□□ 1.15
SUSD1-202ENST00000374263 FAM228AQ86W67 206 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 TMX4Q9H1E5 349 aaPredicted RBP22.21■■□□□ 1.15
SUSD1-202ENST00000374263 VEZTQ9HBM0 779 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 NLRC4Q9NPP4 1024 aa22.21■■□□□ 1.15
SUSD1-202ENST00000374263 BICDL2A1A5D9 508 aa22.2■■□□□ 1.15
SUSD1-202ENST00000374263 OPLAHO14841 1288 aa22.2■■□□□ 1.15
SUSD1-202ENST00000374263 PALMO75781 387 aa22.2■■□□□ 1.15
SUSD1-202ENST00000374263 NONOQ15233 471 aaKnown RBP eCLIP22.2■■□□□ 1.15
SUSD1-202ENST00000374263 CYB5D1Q6P9G0 228 aa22.2■■□□□ 1.15
SUSD1-202ENST00000374263 SIK3Q9Y2K2 1263 aa22.2■■□□□ 1.15
SUSD1-202ENST00000374263 HMGB1P1B2RPK0 211 aaPredicted RBP22.2■■□□□ 1.14
SUSD1-202ENST00000374263 RAD51CO43502 376 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 TDP2O95551 362 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 SNCBQ16143 134 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 FIGNQ5HY92 759 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 DYMQ7RTS9 669 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 PARP9Q8IXQ6 854 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 REXO1Q8N1G1 1221 aaKnown RBP22.2■■□□□ 1.14
SUSD1-202ENST00000374263 NDST4Q9H3R1 872 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 C6orf50Q9HD87 102 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 GOLGA6L10A6NI86 522 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 C21orf2O43822 256 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 DDX42Q86XP3 938 aaKnown RBP eCLIP22.2■■□□□ 1.14
SUSD1-202ENST00000374263 FUKQ8N0W3 1084 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 TBC1D22AQ8WUA7 517 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 SEMA6BQ9H3T3 888 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 TCP11L1Q9NUJ3 509 aa22.2■■□□□ 1.14
SUSD1-202ENST00000374263 POTEMA6NI47 508 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 RGL2O15211 777 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 MARCH6O60337 910 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 HNRNPH3P31942 346 aaKnown RBP22.19■■□□□ 1.14
SUSD1-202ENST00000374263 EHHADHQ08426 723 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 VWA3BQ502W6 1294 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 CABP7Q86V35 215 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 SLF2Q8IX21 1173 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 SERPINB13Q9UIV8 391 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 SNED1Q8TER0 1413 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 ODF2Q5BJF6 829 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 CACNA2D4Q7Z3S7 1137 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 RPAINQ86UA6 219 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 CD302Q8IX05 232 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 MIEF2Q96C03 454 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 TRIM9Q9C026 710 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 TMBIM4Q9HC24 238 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 MTMR4Q9NYA4 1195 aa22.19■■□□□ 1.14
SUSD1-202ENST00000374263 TPX2Q9ULW0 747 aaKnown RBP22.19■■□□□ 1.14
SUSD1-202ENST00000374263 CLGNO14967 610 aa22.18■■□□□ 1.14
SUSD1-202ENST00000374263 CHRNA5P30532 468 aa22.18■■□□□ 1.14
SUSD1-202ENST00000374263 GMNCA6NCL1 334 aa22.18■■□□□ 1.14
SUSD1-202ENST00000374263 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
SUSD1-202ENST00000374263 IKQ13123 557 aaPredicted RBP22.17■■□□□ 1.14
SUSD1-202ENST00000374263 MREGQ8N565 214 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 LCA5LO95447 670 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 OR52Z1P0C646 297 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 CDC42EP5Q6NZY7 148 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 NEK8Q86SG6 692 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 KIAA0895Q8NCT3 520 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 CCDC88AQ3V6T2 1871 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 GCOM1H8Y6P7 765 aaPredicted RBP22.17■■□□□ 1.14
SUSD1-202ENST00000374263 M0R2N6 131 aa22.17■■□□□ 1.14
SUSD1-202ENST00000374263 RPSAP08865 295 aaKnown RBP22.17■■□□□ 1.14
SUSD1-202ENST00000374263 MYZAPP0CAP1 466 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms