RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 GUF1Q8N442 669 aaKnown RBP12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 KIAA0895Q8NCT3 520 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 TNFRSF25Q93038 417 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 C7orf25Q9BPX7 421 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 CAPN11Q9UMQ6 739 aa12.95□□□□□ -0.34
PACSIN1-202ENST00000374043 ANKRD65E5RJM6 399 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 ZBTB39O15060 712 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 BRD3Q15059 726 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 IFI16Q16666 785 aaKnown RBP12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 SLC35G1Q2M3R5 365 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 CFAP221Q4G0U5 840 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 CFAP58Q5T655 872 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 UBLCP1Q8WVY7 318 aaPredicted RBP12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 EIF2AK1Q9BQI3 630 aaKnown RBP12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 DPH5Q9H2P9 285 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 hCG_1984214I3L0E3 225 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 PSMD14O00487 310 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 ZBED4O75132 1171 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 MED24O75448 989 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 NLRX1Q86UT6 975 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 ZNF713Q8N859 430 aaPredicted RBP12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 DCAF4Q8WV16 495 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 FAM237AA0A1B0GTK4 181 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 GSTTP1A0A1W2PQM5 241 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 ATP1A2P50993 1020 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 SPP2Q13103 211 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 MS4A14Q96JA4 679 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 AP1M1Q9BXS5 423 aa12.94□□□□□ -0.34
PACSIN1-202ENST00000374043 SLC9A1P19634 815 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 SPOPO43791 374 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 CATSPER3Q86XQ3 398 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 RETREG2Q8NC44 543 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 ZNF668Q96K58 619 aaPredicted RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 AGBL1Q96MI9 1066 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 PARVGQ9HBI0 331 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 LARSQ9P2J5 1176 aaKnown RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 GNA14O95837 355 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 BAG6P46379 1132 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 RNF187Q5TA31 235 aaPredicted RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 GJB7Q6PEY0 223 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 DUSP9Q99956 384 aaKnown RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 PALMO75781 387 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 NR3C1P04150 777 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 GABPB1Q06547 395 aaPredicted RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 PPP4R3AQ6IN85 833 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 CALCOCO1Q9P1Z2 691 aa12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
PACSIN1-202ENST00000374043 H2AFZP0C0S5 128 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 PEX3P56589 373 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 TBX2Q13207 712 aaPredicted RBP12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 CASP8Q14790 479 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 H2AFVQ71UI9 128 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 LDHDQ86WU2 507 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 RIN2Q8WYP3 895 aaPredicted RBP12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 CCDC151A5D8V7 595 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 SMTNP53814 917 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 CCDC50Q8IVM0 306 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 EPB41L5Q9HCM4 733 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 VPS41P49754 854 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 TNNC1P63316 161 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 PDIA5Q14554 519 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 RASA3Q14644 834 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 C10orf67Q8IYJ2 551 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 CCDC170Q8IYT3 715 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 BLOC1S4Q9NUP1 217 aa12.92□□□□□ -0.34
PACSIN1-202ENST00000374043 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 TNNI1P19237 187 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 GCLMP48507 274 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 GOLGA6CA6NDK9 693 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 GOLGA6DP0CG33 693 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 PSMD2Q13200 908 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 DAGLBQ8NCG7 672 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 ELMO3Q96BJ8 720 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 GOLGA6AQ9NYA3 693 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 KRIT1O00522 736 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 TUBB2AQ13885 445 aa12.91□□□□□ -0.34
PACSIN1-202ENST00000374043 KNOP1Q1ED39 458 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms