RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 CHMP2AO43633 222 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 PBX1P40424 430 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 MTMR1Q13613 665 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 CTTNQ14247 550 aaKnown RBP17.48■□□□□ 0.39
HDAC8-209ENST00000373589 NOLC1Q14978 699 aaKnown RBP eCLIP17.48■□□□□ 0.39
HDAC8-209ENST00000373589 EAPPQ56P03 285 aaPredicted RBP17.48■□□□□ 0.39
HDAC8-209ENST00000373589 ARHGEF16Q5VV41 709 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 SPECC1LQ69YQ0 1117 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
HDAC8-209ENST00000373589 TRIM47Q96LD4 638 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 SEMA6BQ9H3T3 888 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 CYP39A1Q9NYL5 469 aa17.48■□□□□ 0.39
HDAC8-209ENST00000373589 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
HDAC8-209ENST00000373589 NPHP3-ACAD11A0A0J9YXS1 232 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 PPIL2Q13356 520 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 GIT2Q14161 759 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 PTPN21Q16825 1174 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 FAM26FQ5R3K3 315 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 FOXR2Q6PJQ5 311 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 VSIG10LQ86VR7 867 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 C17orf53Q8N3J3 647 aaPredicted RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 SRRTQ9BXP5 876 aaKnown RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 A1CFQ9NQ94 594 aaKnown RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 A0A0G2JMZ2 1700 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 SKILP12757 684 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 SFPQP23246 707 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 EEF1GP26641 437 aaKnown RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
HDAC8-209ENST00000373589 FILIP1LQ4L180 1135 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 TPH2Q8IWU9 490 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 CSGALNACT2Q8N6G5 542 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 MB21D1Q8N884 522 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 GLIS3Q8NEA6 775 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 ANKRD20A12PQ8NF67 263 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 NEK9Q8TD19 979 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 BHMT2Q9H2M3 363 aa17.47■□□□□ 0.39
HDAC8-209ENST00000373589 NR3C2P08235 984 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 MYCLP12524 364 aaPredicted RBP17.46■□□□□ 0.39
HDAC8-209ENST00000373589 PLS1Q14651 629 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 LDLRAD1Q5T700 205 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 GADL1Q6ZQY3 521 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 NSUN6Q8TEA1 469 aaKnown RBP17.46■□□□□ 0.39
HDAC8-209ENST00000373589 TBC1D22BQ9NU19 505 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 BTBD7Q9P203 1132 aa17.46■□□□□ 0.39
HDAC8-209ENST00000373589 WRAP73Q9P2S5 460 aaPredicted RBP17.46■□□□□ 0.39
HDAC8-209ENST00000373589 KRT18P05783 430 aaKnown RBP17.45■□□□□ 0.38
HDAC8-209ENST00000373589 CCND2P30279 289 aa17.45■□□□□ 0.38
HDAC8-209ENST00000373589 CACNB1Q02641 598 aaPredicted RBP17.45■□□□□ 0.38
HDAC8-209ENST00000373589 MOGSQ13724 837 aa17.45■□□□□ 0.38
HDAC8-209ENST00000373589 HERC4Q5GLZ8 1057 aaPredicted RBP17.45■□□□□ 0.38
HDAC8-209ENST00000373589 MYOCDQ8IZQ8 938 aa17.45■□□□□ 0.38
HDAC8-209ENST00000373589 NACC1Q96RE7 527 aa17.45■□□□□ 0.38
HDAC8-209ENST00000373589 REEP2Q9BRK0 252 aa17.45■□□□□ 0.38
HDAC8-209ENST00000373589 N4BP3O15049 544 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 LRRC63Q05C16 580 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 RAD51AP2Q09MP3 1159 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 LRRC41Q15345 812 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 RINT1Q6NUQ1 792 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 MIER3Q7Z3K6 550 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 RIOX2Q8IUF8 465 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 PIGOQ8TEQ8 1089 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 GPRASP2Q96D09 838 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 INPP4AQ96PE3 977 aaPredicted RBP17.44■□□□□ 0.38
HDAC8-209ENST00000373589 LXNQ9BS40 222 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 RUSC1Q9BVN2 902 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 FGFBP2Q9BYJ0 223 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 TMX1Q9H3N1 280 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 TAB2Q9NYJ8 693 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 PKD2L1Q9P0L9 805 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 AGTPBP1Q9UPW5 1226 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 DDX39AO00148 427 aaKnown RBP17.44■□□□□ 0.38
HDAC8-209ENST00000373589 MAFGO15525 162 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 ATP9AO75110 1047 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 ZCWPW2Q504Y3 356 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 C1orf186Q6ZWK4 172 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 VPS16Q9H269 839 aa17.44■□□□□ 0.38
HDAC8-209ENST00000373589 ITIH6Q6UXX5 1313 aa17.43■□□□□ 0.38
HDAC8-209ENST00000373589 ZBTB39O15060 712 aa17.43■□□□□ 0.38
HDAC8-209ENST00000373589 OFD1O75665 1012 aa17.43■□□□□ 0.38
HDAC8-209ENST00000373589 P4HBP07237 508 aaKnown RBP17.43■□□□□ 0.38
HDAC8-209ENST00000373589 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-209ENST00000373589 FAM114A1Q8IWE2 563 aa17.43■□□□□ 0.38
HDAC8-209ENST00000373589 ASCC2Q9H1I8 757 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-209ENST00000373589 MAGEC2Q9UBF1 373 aaPredicted RBP17.43■□□□□ 0.38
HDAC8-209ENST00000373589 FBXO40Q9UH90 709 aa17.43■□□□□ 0.38
HDAC8-209ENST00000373589 TESPA1A2RU30 521 aaPredicted RBP17.42■□□□□ 0.38
HDAC8-209ENST00000373589 PEX10O60683 326 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 RGS20O76081 388 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 POTEJP0CG39 1038 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 HERVK_113P62684 666 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 NLRX1Q86UT6 975 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 TC2NQ8N9U0 490 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 BANK1Q8NDB2 785 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
HDAC8-209ENST00000373589 CNOT6LQ96LI5 555 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms