RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 GMNNO75496 209 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 SF3B3Q15393 1217 aaKnown RBP11.54□□□□□ -0.56
PGK1-201ENST00000373316 VSIG1Q86XK7 387 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 CCDC125Q86Z20 511 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
PGK1-201ENST00000373316 EPB41L4AQ9HCS5 686 aaPredicted RBP11.54□□□□□ -0.56
PGK1-201ENST00000373316 TNRC6CQ9HCJ0 1690 aaKnown RBP11.53□□□□□ -0.56
PGK1-201ENST00000373316 POLRMTO00411 1230 aaKnown RBP11.53□□□□□ -0.56
PGK1-201ENST00000373316 STX2P32856 288 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 POLR2FP61218 127 aaKnown RBP11.53□□□□□ -0.56
PGK1-201ENST00000373316 ABCB5Q2M3G0 1257 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 RAB3IL1Q8TBN0 382 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 NHSQ6T4R5 1651 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 SUN1O94901 812 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 ATF2P15336 505 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 ASPHQ12797 758 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 CEP85LQ5SZL2 805 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 TTC39CQ8N584 583 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 FAM96AQ9H5X1 160 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 PFDN4Q9NQP4 134 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 PFASO15067 1338 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
PGK1-201ENST00000373316 SBK1Q52WX2 424 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 FBXL16Q8N461 479 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 MAPK8IP1Q9UQF2 711 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 PDS5AQ29RF7 1337 aaKnown RBP11.53□□□□□ -0.56
PGK1-201ENST00000373316 HPDP32754 393 aaPredicted RBP11.53□□□□□ -0.56
PGK1-201ENST00000373316 IL9RQ01113 521 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 ADCY2Q08462 1091 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 COMMD10Q9Y6G5 202 aa11.53□□□□□ -0.56
PGK1-201ENST00000373316 K7ENM7 598 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 PPEF1O14829 653 aaPredicted RBP11.52□□□□□ -0.56
PGK1-201ENST00000373316 MED7O43513 233 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 VPS52Q8N1B4 723 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 C17orf53Q8N3J3 647 aaPredicted RBP11.52□□□□□ -0.56
PGK1-201ENST00000373316 SMC1BQ8NDV3 1235 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 MCUR1Q96AQ8 359 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 NHEJ1Q9H9Q4 299 aaPredicted RBP11.52□□□□□ -0.56
PGK1-201ENST00000373316 MID2Q9UJV3 735 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 PCDHA1Q9Y5I3 950 aa11.52□□□□□ -0.56
PGK1-201ENST00000373316 ARHGEF37A1IGU5 675 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 GARSP41250 739 aaKnown RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 SNRPFP62306 86 aaKnown RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 CEP57Q86XR8 500 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 NDST4Q9H3R1 872 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 SERPINB13Q9UIV8 391 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 PCDHA13Q9Y5I0 950 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 UBE4BO95155 1302 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 SLFN12LQ6IEE8 588 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 RINT1Q6NUQ1 792 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 FAM186BQ8IYM0 893 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 Q9H521 79 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 LIMA1Q9UHB6 759 aaKnown RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 TCRBV5S4A2TA0A5A2 114 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 IPO5O00410 1097 aaKnown RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 STAM2O75886 525 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 ATP5HO75947 161 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 LDHAP00338 332 aaKnown RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 LIG4P49917 911 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 JAK3P52333 1124 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 PDIA5Q14554 519 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 C6orf118Q5T5N4 469 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 ANKRD20A3Q5VUR7 823 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 ARMCX5Q6P1M9 558 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 LY9Q9HBG7 655 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 POLLQ9UGP5 575 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 SCINQ9Y6U3 715 aa11.52□□□□□ -0.57
PGK1-201ENST00000373316 MORC2Q9Y6X9 1032 aaPredicted RBP11.52□□□□□ -0.57
PGK1-201ENST00000373316 ABCB11O95342 1321 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 SYNGAP1Q96PV0 1343 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 CYP2D6P10635 497 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 NSFP46459 744 aaKnown RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 PRR16Q569H4 304 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 GUF1Q8N442 669 aaKnown RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 CCDC197Q8NCU1 140 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 PPCSQ9HAB8 311 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 NEDD4P46934 1319 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 NR2F2P24468 414 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 ENOSF1Q7L5Y1 443 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 CCDC117Q8IWD4 279 aaPredicted RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 NSMCE1Q8WV22 266 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 RSAD2Q8WXG1 361 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 CCSER1Q9C0I3 900 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 NLRC4Q9NPP4 1024 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 SCAF8Q9UPN6 1271 aaKnown RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 AKAP11Q9UKA4 1901 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 CFBP00751 764 aa11.51□□□□□ -0.57
PGK1-201ENST00000373316 IRX3P78415 501 aaPredicted RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 ATP2C1P98194 919 aaPredicted RBP11.51□□□□□ -0.57
PGK1-201ENST00000373316 KRT31Q15323 416 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms