RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 TJP3O95049 919 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 HSPA8P11142 646 aaKnown RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 IDO1P14902 403 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 ZNF131P52739 623 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PDE1BQ01064 536 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 SYDE2Q5VT97 1194 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 LRRC8BQ6P9F7 803 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 RIBC1Q8N443 379 aaPredicted RBP11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PPFIBP2Q8ND30 876 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 PIGOQ8TEQ8 1089 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 RSPH1Q8WYR4 309 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 EURLQ9NYK6 297 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 BTBD7Q9P203 1132 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 HSFX1Q9UBD0 423 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 DLC1Q96QB1 1528 aa11.58□□□□□ -0.56
TRERF1-203ENST00000372917 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 GLI1P08151 1106 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 TPBGLP0DKB5 382 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 MORC4Q8TE76 937 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 MAP4K1Q92918 833 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 ATAD3AQ9NVI7 634 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 CTNNAL1Q9UBT7 734 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 TIMM22Q9Y584 194 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 A0A1B0GTH6 734 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 KCTD21Q4G0X4 260 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 SLC9C2Q5TAH2 1124 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 NACC2Q96BF6 587 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
TRERF1-203ENST00000372917 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 NCOA5Q9HCD5 579 aaKnown RBP11.57□□□□□ -0.56
TRERF1-203ENST00000372917 NMRK1Q9NWW6 199 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 TRIM64CA6NLI5 447 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 FOXN1O15353 648 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 CMA1P23946 247 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 RASSF7Q02833 373 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 SULT2A1Q06520 285 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 LRP8Q14114 963 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 SLC7A5P1Q8MH63 180 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 SUPT20HQ8NEM7 779 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 DQX1Q8TE96 717 aaKnown RBP11.57□□□□□ -0.56
TRERF1-203ENST00000372917 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 LARSQ9P2J5 1176 aaKnown RBP11.57□□□□□ -0.56
TRERF1-203ENST00000372917 DKK3Q9UBP4 350 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 SEL1LQ9UBV2 794 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 IVNS1ABPQ9Y6Y0 642 aa11.57□□□□□ -0.56
TRERF1-203ENST00000372917 LCA5LO95447 670 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 ENDOUP21128 410 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 GEMIN4P57678 1058 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 PLVAPQ9BX97 442 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 KRT23Q9C075 422 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 CCDC113Q9H0I3 377 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 DDX18Q9NVP1 670 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 ZNF18P17022 549 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 RNASE9P60153 205 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 COG7P83436 770 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 SLC39A6Q13433 755 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 BIRC3Q13489 604 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 LRRC8CQ8TDW0 803 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 MYD88Q99836 296 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 RBM12Q9NTZ6 932 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 DBF4Q9UBU7 674 aaPredicted RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 DUSP10Q9Y6W6 482 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 ATP5J2-PTCD1G3V325 749 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 PTCD1O75127 700 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 CREG2Q8IUH2 290 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 NACAP1Q9BZK3 213 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 VPS16Q9H269 839 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 METTL5Q9NRN9 209 aaKnown RBP11.56□□□□□ -0.56
TRERF1-203ENST00000372917 AMOTL2Q9Y2J4 779 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 FLT4P35916 1363 aa11.56□□□□□ -0.56
TRERF1-203ENST00000372917 OPHN1O60890 802 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CYP1A1P04798 512 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 VAV1P15498 845 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 RTP1P59025 263 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 HAND2P61296 217 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CYLC2Q14093 348 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 LIN52Q52LA3 116 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CCSAPQ6IQ19 270 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ILDR1Q86SU0 546 aaPredicted RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ENOX1Q8TC92 643 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ASAP3Q8TDY4 903 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 EDC3Q96F86 508 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 TUT1Q9H6E5 874 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ARHGEF3Q9NR81 526 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
TRERF1-203ENST00000372917 MROH7-TTC4A0A0A0MT08 1334 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 TLDC2A0PJX2 215 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 E7ENQ6 273 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 ASMTLO95671 621 aa11.55□□□□□ -0.56
TRERF1-203ENST00000372917 CHN1P15882 459 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms