RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 EIF3CLB5ME19 914 aaKnown RBP12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 GTPBP6O43824 516 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 KIF5BP33176 963 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 KRT2P35908 639 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 TRAPPC10P48553 1259 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 PLS1Q14651 629 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 KRT31Q15323 416 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 SYDE2Q5VT97 1194 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 ICE2Q659A1 982 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 POTEEQ6S8J3 1075 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 GRAMD1CQ8IYS0 662 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 CPLX3Q8WVH0 158 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 EIF3CQ99613 913 aaKnown RBP12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 PHF20Q9BVI0 1012 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 TXNRD2Q9NNW7 524 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 SAGE1Q9NXZ1 904 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 RBPJLQ9UBG7 517 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-201ENST00000372003 LRRIQ3A6PVS8 624 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 VWA5AO00534 786 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 PRPF3O43395 683 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 SHOX2O60902 331 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 ZBED4O75132 1171 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 CLSTN1O94985 981 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 NDUFA10O95299 355 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 SYF2O95926 243 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 GCLCP48506 637 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 AKAP17AQ02040 695 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 ITIH3Q06033 890 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 PAK1Q13153 545 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 Q3C1V9 767 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 DNAJC21Q5F1R6 531 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 TCP11X2Q5H9J9 407 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 ZNF658Q5TYW1 1059 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 C17orf99Q6UX52 265 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 GBP6Q6ZN66 633 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 ADGRF4Q8IZF3 695 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 CPXCR1Q8N123 301 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 ACRBPQ8NEB7 543 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 OR8K1Q8NGG5 319 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 COG1Q8WTW3 980 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 IQCDQ96DY2 449 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 FAM204AQ9H8W3 233 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 RBM28Q9NW13 759 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 BTBD7Q9P203 1132 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 HPCAL4Q9UM19 191 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 SAR1BQ9Y6B6 198 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 PCNTO95613 3336 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 A0A087WUV0 522 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 PLA2G6O60733 806 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 RNF40O75150 1001 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 KRT9P35527 623 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 PDE4CQ08493 712 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 TMEM132BQ14DG7 1078 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 BTNL9Q6UXG8 535 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 LBX2Q6XYB7 198 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 SUGP1Q8IWZ8 645 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 RETREG2Q8NC44 543 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 GPRC5AQ8NFJ5 357 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 NOC3LQ8WTT2 800 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 DNAJC7Q99615 494 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 NUP58Q9BVL2 599 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 RABGAP1Q9Y3P9 1069 aa12.7□□□□□ -0.38
TSPAN1-201ENST00000372003 MYPNQ86TC9 1320 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 A0A087X0B3 334 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 KCNJ18B7U540 433 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 GPR25O00155 361 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 CNMDO75829 334 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 MYL1P05976 194 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 BCRP11274 1271 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 EEF1GP26641 437 aaKnown RBP12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 GNAQP50148 359 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 ATP2C1P98194 919 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 NR5A1Q13285 461 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 STIM1Q13586 685 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 KCNJ12Q14500 433 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 E2F4Q16254 413 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 KLHL10Q6JEL2 608 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 USP49Q70CQ1 688 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 CCDC170Q8IYT3 715 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 SRBD1Q8N5C6 995 aaKnown RBP12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 NOA1Q8NC60 698 aaKnown RBP12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 GTF3C2Q8WUA4 911 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 CFHR5Q9BXR6 569 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 ADAMTS5Q9UNA0 930 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 CTNND2Q9UQB3 1225 aa12.69□□□□□ -0.38
TSPAN1-201ENST00000372003 ADGRA2Q96PE1 1338 aa12.68□□□□□ -0.38
TSPAN1-201ENST00000372003 THSD7BQ9C0I4 1608 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms