RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DNAJC7Q99615 494 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 ZNF341Q9BYN7 854 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 EHD4Q9H223 541 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 COL4A3BPQ9Y5P4 624 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 FHOD1Q9Y613 1164 aa12.99□□□□□ -0.33
PDE6C-201ENST00000371447 ABCB11O95342 1321 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
PDE6C-201ENST00000371447 KRT83P78385 493 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 TMEM119Q4V9L6 283 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 FAM133AQ8N9E0 248 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 BANK1Q8NDB2 785 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 OPLAHO14841 1288 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 ALAS1P13196 640 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
PDE6C-201ENST00000371447 KIF11P52732 1056 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 ERMNQ8TAM6 284 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 GOLPH3Q9H4A6 298 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 PACSIN2Q9UNF0 486 aaPredicted RBP12.98□□□□□ -0.33
PDE6C-201ENST00000371447 LY75O60449 1722 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 ASTN2O75129 1339 aaPredicted RBP12.98□□□□□ -0.33
PDE6C-201ENST00000371447 TMEM150BA6NC51 233 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 MAGEA1P43355 309 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 CASP4P49662 377 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 NT5C2P49902 561 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 HAUS3Q68CZ6 603 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 CC2D1AQ6P1N0 951 aaPredicted RBP12.98□□□□□ -0.33
PDE6C-201ENST00000371447 LRRC55Q6ZSA7 311 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 EIF2AK1Q9BQI3 630 aaKnown RBP12.98□□□□□ -0.33
PDE6C-201ENST00000371447 ADAMTS1Q9UHI8 967 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 CAPN6Q9Y6Q1 641 aa12.98□□□□□ -0.33
PDE6C-201ENST00000371447 GAS7O60861 476 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 RSBN1LQ6PCB5 846 aaPredicted RBP12.97□□□□□ -0.33
PDE6C-201ENST00000371447 GJB7Q6PEY0 223 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 GPR161Q8N6U8 529 aaKnown RBP12.97□□□□□ -0.33
PDE6C-201ENST00000371447 SAR1BQ9Y6B6 198 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 PLIN4Q96Q06 1357 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 TMCO5BA8MYB1 307 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 FGFR1OPO95684 399 aaKnown RBP12.97□□□□□ -0.33
PDE6C-201ENST00000371447 ARP10275 920 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 MYCLP12524 364 aaPredicted RBP12.97□□□□□ -0.33
PDE6C-201ENST00000371447 SLC9A1P19634 815 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 CYP2J2P51589 502 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 VSNL1P62760 191 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
PDE6C-201ENST00000371447 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 USP11P51784 963 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 PPP1R18Q6NYC8 613 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 NIM1KQ8IY84 436 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 SLFN12Q8IYM2 578 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 CEP112Q8N8E3 955 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 MKL1Q969V6 931 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 SPAG5Q96R06 1193 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 NUP58Q9BVL2 599 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 ABCB6Q9NP58 842 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 GCOM1H8Y6P7 765 aaPredicted RBP12.96□□□□□ -0.33
PDE6C-201ENST00000371447 CETN3O15182 167 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 FAM13AO94988 1023 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 POLR2MP0CAP2 368 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 PLA2G4AP47712 749 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 COG2Q14746 738 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 LONRF2Q1L5Z9 754 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 CNPY4Q8N129 248 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 WDR18Q9BV38 432 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 LRRC27Q9C0I9 530 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
PDE6C-201ENST00000371447 KCNMB3Q9NPA1 279 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 SEPT11Q9NVA2 429 aaKnown RBP12.96□□□□□ -0.33
PDE6C-201ENST00000371447 CTDP1Q9Y5B0 961 aaPredicted RBP12.96□□□□□ -0.33
PDE6C-201ENST00000371447 KDM3AQ9Y4C1 1321 aa12.96□□□□□ -0.33
PDE6C-201ENST00000371447 SLC7A5Q01650 507 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 KCNMA1Q12791 1236 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 KCNH2Q12809 1159 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.34
PDE6C-201ENST00000371447 NFRKBQ6P4R8 1299 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 NSMFQ6X4W1 530 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 ETNPPLQ8TBG4 499 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 C7orf43Q8WVR3 580 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 RABGGTAQ92696 567 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 CCDC102AQ96A19 550 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 MTMR8Q96EF0 704 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 ANKZF1Q9H8Y5 726 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 SLX4Q8IY92 1834 aa12.96□□□□□ -0.34
PDE6C-201ENST00000371447 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
PDE6C-201ENST00000371447 FTCDO95954 541 aa12.95□□□□□ -0.34
PDE6C-201ENST00000371447 EIF2AK2P19525 551 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms