RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 NAPAP54920 295 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 DEFB103AP81534 67 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 MKRN4PQ13434 485 aaPredicted RBP18.47■□□□□ 0.55
VMA21-202ENST00000370361 HIC1Q14526 733 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 CCDC82Q8N4S0 544 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 SAMD11Q96NU1 681 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 TGS1Q96RS0 853 aaKnown RBP18.47■□□□□ 0.55
VMA21-202ENST00000370361 MICAL3Q7RTP6 2002 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 COL4A6Q14031 1691 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 NFASCO94856 1347 aa18.47■□□□□ 0.55
VMA21-202ENST00000370361 TTC28Q96AY4 2481 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 DOCK5Q9H7D0 1870 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 ADCY7P51828 1080 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 ERVK-21P61565 698 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 ARHGAP4P98171 946 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 FGD1P98174 961 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 CCDC85BQ15834 202 aaPredicted RBP18.46■□□□□ 0.55
VMA21-202ENST00000370361 UBE2SQ16763 222 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 UTP14CQ5TAP6 766 aaKnown RBP18.46■□□□□ 0.55
VMA21-202ENST00000370361 WWC2Q6AWC2 1192 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 TRIM50Q86XT4 487 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 FBXL16Q8N461 479 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 DBF4BQ8NFT6 615 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
VMA21-202ENST00000370361 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 BCAS3Q9H6U6 928 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 JPH1Q9HDC5 661 aaPredicted RBP18.46■□□□□ 0.55
VMA21-202ENST00000370361 SETD4Q9NVD3 440 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 BARHL2Q9NY43 387 aa18.46■□□□□ 0.55
VMA21-202ENST00000370361 RRN3P2A6NIE6 340 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 GOLGA8AA7E2F4 631 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 GOLGA8BA8MQT2 603 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 EPB41L2O43491 1005 aaKnown RBP18.45■□□□□ 0.54
VMA21-202ENST00000370361 SLC26A2P50443 739 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 SP4Q02446 784 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 FUT2Q10981 343 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 PPFIA1Q13136 1202 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 NIPA1Q7RTP0 329 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 GLG1Q92896 1179 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 KCNB2Q92953 911 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 MXRA8Q9BRK3 442 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 SLC9A2Q9UBY0 812 aa18.45■□□□□ 0.54
VMA21-202ENST00000370361 KLF18A0A0U1RQI7 1052 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
VMA21-202ENST00000370361 ATP9AO75110 1047 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 REC8O95072 547 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 NEFLP07196 543 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 HTRA4P83105 476 aaPredicted RBP18.44■□□□□ 0.54
VMA21-202ENST00000370361 CEP55Q53EZ4 464 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 MICALL1Q8N3F8 863 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 SP7Q8TDD2 431 aaPredicted RBP18.44■□□□□ 0.54
VMA21-202ENST00000370361 KCNH7Q9NS40 1196 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 TUBE1Q9UJT0 475 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 SIP14410 1827 aa18.44■□□□□ 0.54
VMA21-202ENST00000370361 NID2Q14112 1375 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 GSTTP1A0A1W2PQM5 241 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 ESYT2A0FGR8 921 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 LINC01553A4QN01 128 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 PSMA5P28066 241 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 SREBF1P36956 1147 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 METAP2P50579 478 aaKnown RBP eCLIP18.43■□□□□ 0.54
VMA21-202ENST00000370361 GRB10Q13322 594 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 COL9A3Q14050 684 aaPredicted RBP18.43■□□□□ 0.54
VMA21-202ENST00000370361 SKIV2LQ15477 1246 aaKnown RBP18.43■□□□□ 0.54
VMA21-202ENST00000370361 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 RASEFQ8IZ41 740 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 MYOCDQ8IZQ8 938 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 TOP1MTQ969P6 601 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 ANO3Q9BYT9 981 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 IFIH1Q9BYX4 1025 aaKnown RBP18.43■□□□□ 0.54
VMA21-202ENST00000370361 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 SQORQ9Y6N5 450 aa18.43■□□□□ 0.54
VMA21-202ENST00000370361 V9GY48 417 aaPredicted RBP18.43■□□□□ 0.54
VMA21-202ENST00000370361 PRRC2BQ5JSZ5 2229 aaKnown RBP18.43■□□□□ 0.54
VMA21-202ENST00000370361 COL4A4P53420 1690 aaPredicted RBP18.42■□□□□ 0.54
VMA21-202ENST00000370361 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 EPOPA6NHQ4 379 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 STXBP3O00186 592 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 CTSHP09668 335 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 CLK2P49760 499 aaKnown RBP18.42■□□□□ 0.54
VMA21-202ENST00000370361 GRIK4Q16099 956 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 PLPPR4Q7Z2D5 763 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 YME1L1Q96TA2 773 aa18.42■□□□□ 0.54
VMA21-202ENST00000370361 SPTBN5Q9NRC6 3674 aaKnown RBP18.42■□□□□ 0.54
VMA21-202ENST00000370361 LCHNA4D1U4 455 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 MEIS1O00470 390 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 LPXNO60711 386 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 ARHGEF15O94989 841 aa18.41■□□□□ 0.54
VMA21-202ENST00000370361 HSPA4P34932 840 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms