RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 IFT20Q8IY31 132 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 TAF4BQ92750 862 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
LRIF1-201ENST00000369763 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 CHORDC1Q9UHD1 332 aaPredicted RBP11.97□□□□□ -0.49
LRIF1-201ENST00000369763 PVALEFA0A1B0GWK0 134 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 EIF3HO15372 352 aaKnown RBP eCLIP11.97□□□□□ -0.49
LRIF1-201ENST00000369763 CHMP2AO43633 222 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 ABCB4P21439 1286 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 DPH5Q9H2P9 285 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 POLLQ9UGP5 575 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 GGA1Q9UJY5 639 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 ARAP2Q8WZ64 1704 aa11.97□□□□□ -0.49
LRIF1-201ENST00000369763 SMIM23A6NLE4 172 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 RPS6KA4O75676 772 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 ERLIN2O94905 339 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 HOXA13P31271 388 aaPredicted RBP11.96□□□□□ -0.49
LRIF1-201ENST00000369763 TADA2BQ86TJ2 420 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 PPM1EQ8WY54 764 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 SNED1Q8TER0 1413 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 GRIN2DO15399 1336 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 GRID2IPA4D2P6 1211 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 MED24O75448 989 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 SERPING1P05155 500 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 ITGA4P13612 1032 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 CASP4P49662 377 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
LRIF1-201ENST00000369763 RDH13Q8NBN7 331 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 KAT2BQ92831 832 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 CELF4Q9BZC1 486 aaKnown RBP11.96□□□□□ -0.49
LRIF1-201ENST00000369763 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 A0A1B0GUL6 1792 aa11.96□□□□□ -0.49
LRIF1-201ENST00000369763 RPS6KA5O75582 802 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 HNRNPH3P31942 346 aaKnown RBP11.96□□□□□ -0.5
LRIF1-201ENST00000369763 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.52e-6■■■□□ 15.9
LRIF1-201ENST00000369763 UBXN2AP68543 259 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 CDK17Q00537 523 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 ASTE1Q2TB18 679 aaPredicted RBP11.96□□□□□ -0.5
LRIF1-201ENST00000369763 TBC1D10BQ4KMP7 808 aaPredicted RBP11.96□□□□□ -0.5
LRIF1-201ENST00000369763 TRAPPC3LQ5T215 181 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 ZFPM1Q8IX07 1006 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 MSL3Q8N5Y2 521 aaKnown RBP11.96□□□□□ -0.5
LRIF1-201ENST00000369763 CYP2W1Q8TAV3 490 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 UBLCP1Q8WVY7 318 aaPredicted RBP11.96□□□□□ -0.5
LRIF1-201ENST00000369763 CUL5Q93034 780 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.5
LRIF1-201ENST00000369763 CEP72Q9P209 647 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 AMACRQ9UHK6 382 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 PLAAQ9Y263 795 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 PCDHA1Q9Y5I3 950 aa11.96□□□□□ -0.5
LRIF1-201ENST00000369763 GOLGA8KD6RF30 607 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 MYBP10242 640 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 RBM5P52756 815 aaKnown RBP eCLIP11.95□□□□□ -0.5
LRIF1-201ENST00000369763 PPP4CP60510 307 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 NFIAQ12857 509 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 RPS6KA1Q15418 735 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 EMBQ6PCB8 327 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 ZNF571Q7Z3V5 609 aaPredicted RBP11.95□□□□□ -0.5
LRIF1-201ENST00000369763 CCDC65Q8IXS2 484 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 UHMK1Q8TAS1 419 aaKnown RBP11.95□□□□□ -0.5
LRIF1-201ENST00000369763 PIGOQ8TEQ8 1089 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 CAPN7Q9Y6W3 813 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 SPATA31A5Q5VU36 1347 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 SPATA31A7Q8IWB4 1347 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 GPR75-ASB3A0A0A6YYF3 556 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 E7EVH7 732 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 MYO1FO00160 1098 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 ZBTB39O15060 712 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 TMOD1P28289 359 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 FLT3P36888 993 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 SLC18A3Q16572 532 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 MAEAQ7L5Y9 396 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 SFR1Q86XK3 245 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 USP40Q9NVE5 1235 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 LEMD3Q9Y2U8 911 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 NHSL1Q5SYE7 1610 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 XIRP1Q702N8 1843 aaKnown RBP11.95□□□□□ -0.5
LRIF1-201ENST00000369763 INPP5BP32019 993 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 ZNF662Q6ZS27 426 aa11.95□□□□□ -0.5
LRIF1-201ENST00000369763 AJAP1Q9UKB5 411 aaPredicted RBP11.95□□□□□ -0.5
LRIF1-201ENST00000369763 G3V3G9 751 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 CETN3O15182 167 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 GFPT2O94808 682 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 NR1D1P20393 614 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 PAK2Q13177 524 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 NAB2Q15742 525 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 DCAF8Q5TAQ9 597 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 U2AF1L4Q8WU68 220 aaKnown RBP11.94□□□□□ -0.5
LRIF1-201ENST00000369763 RGL1Q9NZL6 768 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 GCNT3O95395 438 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 CYP11B2P19099 503 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 PPP1R2P41236 205 aa11.94□□□□□ -0.5
LRIF1-201ENST00000369763 MRPL12P52815 198 aaKnown RBP11.94□□□□□ -0.5
LRIF1-201ENST00000369763 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms