RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MFN1Q8IWA4 741 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 U2AF1L4Q8WU68 220 aaKnown RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 RELTQ969Z4 430 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 TCHPQ9BT92 498 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 CSRNP2Q9H175 543 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 C11orf49Q9H6J7 331 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 AASDHPPTQ9NRN7 309 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 SPATA7Q9P0W8 599 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 PFDN2Q9UHV9 154 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 LEMD3Q9Y2U8 911 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 PI4K2BG5E9Z4 385 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 DPYSL4O14531 572 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 CXCL11O14625 94 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 OPA1O60313 960 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 NEMFO60524 1076 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 SEC24BO95487 1268 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 ZNF76P36508 570 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 MNAT1P51948 309 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 PPATQ06203 517 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 LAMC2Q13753 1193 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 GNL2Q13823 731 aaKnown RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 PDE3AQ14432 1141 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 RRP12Q5JTH9 1297 aaKnown RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 NUGGCQ68CJ6 796 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 TRIM42Q8IWZ5 723 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 NEK11Q8NG66 645 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 CTCFLQ8NI51 663 aaPredicted RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 C2orf49Q9BVC5 232 aaPredicted RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 SENP2Q9HC62 589 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 GPCPD1Q9NPB8 672 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 PA2G4Q9UQ80 394 aaKnown RBP5.62□□□□□ -1.51
UBE3D-202ENST00000369746 FAM50BQ9Y247 325 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 COL4A6Q14031 1691 aa5.62□□□□□ -1.51
UBE3D-202ENST00000369746 IGF2BP3O00425 579 aaKnown RBP eCLIP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 AKAP10O43572 662 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 AHCYL1O43865 530 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ITGB8P26012 769 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CNGA1P29973 690 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 KRT20P35900 424 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 MATR3P43243 847 aaKnown RBP eCLIP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 PTPN12Q05209 780 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 RILPL1Q5EBL4 403 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 EEPD1Q7L9B9 569 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SPATA21Q7Z572 469 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC50Q8IVM0 306 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SLC7A5P1Q8MH63 180 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CARNMT1Q8N4J0 409 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SMARCE1Q969G3 411 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 PARK7Q99497 189 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CARD14Q9BXL6 1004 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SEMA6BQ9H3T3 888 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ALG2Q9H553 416 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 RABEP2Q9H5N1 569 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 DBNDD1Q9H9R9 158 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ZNHIT6Q9NWK9 470 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ZNF69Q9UC07 566 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 MYO6Q9UM54 1294 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 POLR2AP24928 1970 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 LIN7AO14910 233 aaPredicted RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SLU7O95391 586 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 BCRP11274 1271 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CYP11B2P19099 503 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 HNRNPH1P31943 449 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SSTR3P32745 418 aaPredicted RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SNAPC2Q13487 334 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 KRT72Q14CN4 511 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 RASA2Q15283 850 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ASIC2Q16515 512 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 TMEM31Q5JXX7 168 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ANGEL2Q5VTE6 544 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SWSAP1Q6NVH7 229 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CEP68Q76N32 757 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 RSRC2Q7L4I2 434 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ERO1BQ86YB8 467 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 REXO1L1PQ8IX06 675 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC170Q8IYT3 715 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 FAM200AQ8TCP9 573 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ZFAND2BQ8WV99 257 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SRRTQ9BXP5 876 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 PCSK1NQ9UHG2 260 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 BARX2Q9UMQ3 279 aaPredicted RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 XDHP47989 1333 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 TNRC18O15417 2968 aaPredicted RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SH3TC1Q8TE82 1336 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 E2F6O75461 281 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 MTRF1O75570 445 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 FESP07332 822 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 PARP1P09874 1014 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 INPP5BP32019 993 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SKIV2L2P42285 1042 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 ACAP1Q15027 740 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CRTC2Q53ET0 693 aaPredicted RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 MAP3K21Q5TCX8 1036 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 C1orf122Q6ZSJ8 110 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC80Q76M96 950 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 BMP8AQ7Z5Y6 402 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms