RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 PRR12Q9ULL5 1215 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ARFGEF2Q9Y6D5 1785 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 E9PMD0 336 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 P4HBP07237 508 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 NEFHP12036 1026 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 DPEP1P16444 411 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 OAS2P29728 719 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 TGFB2P61812 414 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 MYL7Q01449 175 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 CACNB1Q02641 598 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 CTTNQ14247 550 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 TERF2Q15554 542 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ARHGAP44Q17R89 818 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 EAPPQ56P03 285 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ILDR1Q86SU0 546 aaPredicted RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 CEP170P1Q96L14 293 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 IDI2Q9BXS1 227 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 IL17RBQ9NRM6 502 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 C1orf112Q9NSG2 853 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 MTRF1LQ9UGC7 380 aaKnown RBP5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 ITIH6Q6UXX5 1313 aa5.82□□□□□ -1.48
SMNDC1-202ENST00000369603 TRIM49BA6NDI0 452 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SOWAHDA6NJG2 315 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 TMEM110-MUSTN1A8MSY1 372 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 IPO5O00410 1097 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 EYA4O95677 639 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SERPING1P05155 500 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 BPIFB4P59827 614 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SPP2Q13103 211 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 ARID5BQ14865 1188 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 EPHA7Q15375 998 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GPR162Q16538 588 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 FBXO38Q6PIJ6 1188 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 PTF1AQ7RTS3 328 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 PKD1L3Q7Z443 1732 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SRGAP1Q7Z6B7 1085 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 CLEC10AQ8IUN9 316 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 DHX37Q8IY37 1157 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GPATCH11Q8N954 259 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GIMAP8Q8ND71 665 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GMCL1P1Q8NEA9 526 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 U2AF1L4Q8WU68 220 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 TMEM60Q9H2L4 133 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 KCNF1Q9H3M0 494 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 KMT5AQ9NQR1 393 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 ABHD10Q9NUJ1 306 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 TYW1Q9NV66 732 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 AMFRQ9UKV5 643 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SYNPO2Q9UMS6 1093 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 ZHX2Q9Y6X8 837 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 LAMB4A4D0S4 1761 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM237AA0A1B0GTK4 181 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 C19orf81C9J6K1 198 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 UBE2Q2LH0YL09 131 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 HNRNPDLO14979 420 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SNX16P57768 344 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GOLGA8FQ08AF8 430 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GOLGA8DPQ0D2H9 430 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 NFIAQ12857 509 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 KNOP1Q1ED39 458 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 TAX1BP1Q86VP1 789 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC125Q86Z20 511 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SLC35F6Q8N357 371 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 MCPH1Q8NEM0 835 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 POMGNT1Q8WZA1 660 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 FAM107BQ9H098 131 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 STMN4Q9H169 189 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 NHEJ1Q9H9Q4 299 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 RNF146Q9NTX7 359 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 RNF14Q9UBS8 474 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SEPT9Q9UHD8 586 aaPredicted RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SPDYE2BA6NHP3 402 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 CEP104O60308 925 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SPDYE6P0CI01 402 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 COPB2P35606 906 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 QARSP47897 775 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 MFAP3P55082 362 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 GRIN1Q05586 938 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 FMR1Q06787 632 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 TFDP1Q14186 410 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 SFR1Q86XK3 245 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 ARFGAP2Q8N6H7 521 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 RBM46Q8TBY0 533 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 MAIP1Q8WWC4 291 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 NT5C1BQ96P26 610 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 EIF2AK1Q9BQI3 630 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 CCDC77Q9BR77 488 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 TIPINQ9BVW5 301 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 RAVER2Q9HCJ3 691 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 KCND2Q9NZV8 630 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 CEP72Q9P209 647 aa5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 CNOT7Q9UIV1 285 aaKnown RBP5.81□□□□□ -1.48
SMNDC1-202ENST00000369603 POTEFA5A3E0 1075 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 LRRIQ4A6NIV6 560 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 PRPF6O94906 941 aaKnown RBP5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 POTEIP0CG38 1075 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 P4HA1P13674 534 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 TMOD1P28289 359 aa5.8□□□□□ -1.48
SMNDC1-202ENST00000369603 RHBDL3P58872 404 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms