RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 KLHL30Q0D2K2 578 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 YTHDF3Q7Z739 585 aaKnown RBP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 FAM133AQ8N9E0 248 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ZNF473Q8WTR7 871 aaKnown RBP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 HAS1Q92839 578 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ISCUQ9H1K1 167 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 TAF1DQ9H5J8 278 aaPredicted RBP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 TMBIM4Q9HC24 238 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 PLCB1Q9NQ66 1216 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 PLAAQ9Y263 795 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ZNF831Q5JPB2 1677 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 SRRM3A6NNA2 597 aaPredicted RBP13.81□□□□□ -0.2
LINC01561-201ENST00000369071 BTDP43251 543 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ARID5AQ03989 594 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 ASIC2Q16515 512 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 HYIQ5T013 277 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 LRIG3Q6UXM1 1119 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 SCFD2Q8WU76 684 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
LINC01561-201ENST00000369071 FRMPD2Q68DX3 1309 aaPredicted RBP13.8□□□□□ -0.2
LINC01561-201ENST00000369071 GPR75-ASB3A0A0A6YYF3 556 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 KIAA0754O94854 1291 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 KCNQ4P56696 695 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 DPY19L2P1Q6NXN4 242 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 NLRP14Q86W24 1093 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 KLHL7Q8IXQ5 586 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 OTUD6BQ8N6M0 293 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 TBC1D7Q9P0N9 293 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 SRP68Q9UHB9 627 aaKnown RBP13.8□□□□□ -0.2
LINC01561-201ENST00000369071 NARFQ9UHQ1 456 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 LEMD3Q9Y2U8 911 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 CAPN7Q9Y6W3 813 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
LINC01561-201ENST00000369071 H0YGN5 161 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 KIF4AO95239 1232 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 ZBTB48P10074 688 aaPredicted RBP13.79□□□□□ -0.2
LINC01561-201ENST00000369071 TNNI2P48788 182 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
LINC01561-201ENST00000369071 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 CEP85LQ5SZL2 805 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 IRF2BP2Q7Z5L9 587 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 NELFCDQ8IXH7 590 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 TEX11Q8IYF3 940 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 MYCBPAPQ8TBZ2 947 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 SCFD1Q8WVM8 642 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 TAF4BQ92750 862 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 GJA10Q969M2 543 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 CCT8L2Q96SF2 557 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 GGA2Q9UJY4 613 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 NFS1Q9Y697 457 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 KCNK3O14649 394 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 HSD17B3P37058 310 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 USP11P51784 963 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 SEC24CP53992 1094 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 C10orf76Q5T2E6 689 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 TPTE2Q6XPS3 522 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 MAATS1Q7Z4T9 603 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 LRRC57Q8N9N7 239 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 ACTRT1Q8TDG2 376 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 PBKQ96KB5 322 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
LINC01561-201ENST00000369071 ANKIB1Q9P2G1 1089 aa13.79□□□□□ -0.2
LINC01561-201ENST00000369071 DDX25Q9UHL0 483 aaKnown RBP13.79□□□□□ -0.2
LINC01561-201ENST00000369071 E9PMD0 336 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 FAM107AO95990 144 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 SNHG28P0DPA3 235 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 PTK2Q05397 1052 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 CUL1Q13616 776 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 ENOX2Q16206 610 aaKnown RBP13.78□□□□□ -0.2
LINC01561-201ENST00000369071 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
LINC01561-201ENST00000369071 UBE2SQ16763 222 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 ZNF571Q7Z3V5 609 aaPredicted RBP13.78□□□□□ -0.2
LINC01561-201ENST00000369071 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 MYO1FO00160 1098 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 RHBDL3P58872 404 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
LINC01561-201ENST00000369071 ADAM9Q13443 819 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 EDRF1Q3B7T1 1238 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 PPP1R18Q6NYC8 613 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 C6orf89Q6UWU4 347 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 ZNF804AQ7Z570 1209 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 NT5C3AQ9H0P0 336 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 MTMR4Q9NYA4 1195 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 KDM3AQ9Y4C1 1321 aa13.78□□□□□ -0.2
LINC01561-201ENST00000369071 PLIN4Q96Q06 1357 aa13.77□□□□□ -0.2
LINC01561-201ENST00000369071 TNRC6CQ9HCJ0 1690 aaKnown RBP13.77□□□□□ -0.21
LINC01561-201ENST00000369071 PPP1R11O60927 126 aaPredicted RBP13.77□□□□□ -0.21
LINC01561-201ENST00000369071 SSBP05455 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms